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SCNpilot_cont_300_bf_scaffold_1608_9

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(9570..9773)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DP23_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 139
  • Evalue 9.10e-31
Cold-shock protein {ECO:0000313|EMBL:KIO50055.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 67.0
  • Bit_score: 139
  • Evalue 1.30e-30
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 138
  • Evalue 5.70e-31

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCAACTGGTACAGTCAAATGGTTTAACGATTCCAAGGGTTTTGGGTTCATTACCCCGGATGATGGCAGTGAAGATTTATTCGCGCACTTTTCAGCAATCAATATGTCGGGATTCAAAACCCTCAAGGAAGGGCAGAAAGTGAGCTTTGAAGTCACCCAGGGTCCGAAGGGCAAGCAGGCATCCAATATTCAGTCTGCATAA
PROTEIN sequence
Length: 68
MATGTVKWFNDSKGFGFITPDDGSEDLFAHFSAINMSGFKTLKEGQKVSFEVTQGPKGKQASNIQSA*