ggKbase home page

SCNpilot_cont_300_bf_scaffold_2870_1

Organism: SCNPILOT_CONT_300_BF_Nitrosospira_56_141

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 1..783

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DPH3_METS0 similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 248.0
  • Bit_score: 285
  • Evalue 5.20e-74
RND transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 254.0
  • Bit_score: 286
  • Evalue 6.50e-75
RND transporter MFP subunit {ECO:0000313|EMBL:AJP48495.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 254.0
  • Bit_score: 286
  • Evalue 3.20e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
GCTGAACGCTGGGAGCAGCTTGTGGATTCGGGGTATGCTTCAAAACAGGCTGCCGCTGAAAAAACAGGCGACTTCAAGACCAAGGAGGCTCTGGTTAAATCGGCTCAGGCGAATGTCGAGCGTCTGGTGGCATTGAAGAAGTTTACCCGCATCGTTGCTCCCTTTGACGGTATCGTCACTGCCCGCCTGACTGACATCGGGGTACTGGTCAATGCGGGCAGCGGCGTGGGCCAGCAGCTCTTCGAAATATCGAATACCCGGACATTGCGGGTATATGTCAGCGTACCGCAGGTTTACGTACCCCGTATTCCGCCTGGCAGCCCGGTTGCCATCACCGTACCGGAACGGCCGGGCAAGGCCTACTCCGCGACAGTCGCGGCATCGGCGCAGGCGGTTGACAGTACTGCGGGAACGACGCTCATGCAGATTCACGTCGACAATGCCGATGGCGAGTTGCTGCCCGGGGCGTTCGCAAATATCAACTTCCAGTTACCCGGAGACGAGACAGTGATGAGCGTGCCTGCGAGCGCGCTGATGTTCGACAAGGCGGGATTGCGTGTTGCGACGGTGGATGCGAACAACAGGGTTGTGCTAAAAACGGTGACTATCATGCGCGACTTGGGCAAGACTGTCGAGCTTGCCTCGGGCCTGGTTCCTGGCGATCGCGTTATCGAAAGCCCCCCGGATGGCATCGCGGATGGCGATGGCGTGCGCATCAGCCACGCCGCGGGCAAGCCAGACAGAACCAATGGCGCGCCCAGCGGCGGCAAGGGCTTTTACTAG
PROTEIN sequence
Length: 261
AERWEQLVDSGYASKQAAAEKTGDFKTKEALVKSAQANVERLVALKKFTRIVAPFDGIVTARLTDIGVLVNAGSGVGQQLFEISNTRTLRVYVSVPQVYVPRIPPGSPVAITVPERPGKAYSATVAASAQAVDSTAGTTLMQIHVDNADGELLPGAFANINFQLPGDETVMSVPASALMFDKAGLRVATVDANNRVVLKTVTIMRDLGKTVELASGLVPGDRVIESPPDGIADGDGVRISHAAGKPDRTNGAPSGGKGFY*