ggKbase home page

SCNpilot_cont_300_bf_scaffold_29443_3

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: comp(1686..2183)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=700598 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 165.0
  • Bit_score: 304
  • Evalue 1.20e-79
Transcription termination factor Rho n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF35_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 165.0
  • Bit_score: 302
  • Evalue 2.00e-79
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 165.0
  • Bit_score: 304
  • Evalue 2.50e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 498
GTGGAATGTGGTCATGATGTGGTCATCCTGCTGGATTCGATCACCCGTTTGGCAAGGGCTCATAATACCGTAGCTCCTGCATCAGGCAAGGTGCTTTCCGGCGGTGTGGAAGCCAATGCCATGCAGAAGCCCAAACAGTTTTTTGGCGCAGCCAGGAAAATAGAAAACGGAGGCTCTCTTACTATACTGGCAACAGCATTGATAGATACCGGTTCAAAAATGGACGAGGTCATCTTTGAGGAATTTAAGGGAACGGGTAATATGGAGCTTCAGTTGGACAGGAGATTGGCCAACAGGAGGATCTTCCCTGCCATTGACCTGGTTGCTTCTTCTACAAGGCGCGAAGACCTTTTGCTCGACAGAGATGTGCTGAAGAGGATGCACCTGCTCCGGAATTATCTCGCCGATATGAATTCGGAAGAAGCTATGAATGAATTGCTGAAACGTATGCGCGGCACCAAAGACAACCAGGAGTTCCTGGCAAGCATGAACAGCTAA
PROTEIN sequence
Length: 166
VECGHDVVILLDSITRLARAHNTVAPASGKVLSGGVEANAMQKPKQFFGAARKIENGGSLTILATALIDTGSKMDEVIFEEFKGTGNMELQLDRRLANRRIFPAIDLVASSTRREDLLLDRDVLKRMHLLRNYLADMNSEEAMNELLKRMRGTKDNQEFLASMNS*