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SCNpilot_cont_300_bf_scaffold_31338_1

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: comp(140..742)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8D8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 198.0
  • Bit_score: 163
  • Evalue 2.30e-37
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 198.0
  • Bit_score: 163
  • Evalue 6.40e-38
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV99108.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 198.0
  • Bit_score: 163
  • Evalue 3.20e-37

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 603
ATGCTCAGTGCTTCTGAAGATAGAGAAAGATGTCTTTTAGATGAAGTAGCCAATGGTAATGAAAGGGCTTATACTTTGCTATTTCAAACCTACAGACCCAAAATTTACTCTTTTATCTTTCGCATATCAGGTTCAGCTCAATCAGCCGAAGATGTTACCCAGGATGTATTTGCTAAAATATGGCAAACCAGGGCAGACCTTGTCAGAATCAAAAATTTTAATGCTTATATTTTCCGTATAGCGCACAATCACTTTCTGAATGCCCTCAAGAAAATGGCCAAAGAAACGCTCGTTTTACAAAAAATTGAAAAGCAGTCAGCTACCGTGGAAGAGGCTTCTGAAGTCCTGGAAAAGAAAGAGCTGCGGCGCTTATTTCATTTGGTTGTTGATGAACTGCCGCAAAAGCAGAAAATGGTTTTCCTGCTGAGTAAGGAAAAAGGAATGAAGCAGGAGGAAATTTCTGAACGGCTTAATATATCCGTAGTAACGGTTAAAAGCCATATGACCCAGGCATTCCGGAGTATACGAAAGAAATTAAAAACCGTTCATTATTTTGTCACTATCCCTCTTATAATTATGCTCAGCTGTCTTTTTATGTGTTAA
PROTEIN sequence
Length: 201
MLSASEDRERCLLDEVANGNERAYTLLFQTYRPKIYSFIFRISGSAQSAEDVTQDVFAKIWQTRADLVRIKNFNAYIFRIAHNHFLNALKKMAKETLVLQKIEKQSATVEEASEVLEKKELRRLFHLVVDELPQKQKMVFLLSKEKGMKQEEISERLNISVVTVKSHMTQAFRSIRKKLKTVHYFVTIPLIIMLSCLFMC*