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SCNpilot_cont_300_bf_scaffold_55462_1

Organism: SCNPILOT_CONT_300_BF_Sphingobacteriia_43_4b

partial RP 35 / 55 MC: 5 BSCG 37 / 51 MC: 6 ASCG 7 / 38
Location: 165..1085

Top 3 Functional Annotations

Value Algorithm Source
collagen-binding protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B77564 similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 307.0
  • Bit_score: 232
  • Evalue 4.70e-58
TonB-dependent receptor SusC {ECO:0000313|EMBL:KHJ38131.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 306.0
  • Bit_score: 239
  • Evalue 5.40e-60
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 308.0
  • Bit_score: 217
  • Evalue 7.50e-54

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 921
ATGGCTGCATGCTTACAGGTAAGCGCAAAAAGTTACTCTCAACGGGTTACGCTTTCAGAAAAATCTATTTCGATTGAAAAAGCATTGAACAAGATAAAAGATCAGACTGGATGTTTTTTCTTTTATCAACATGAGCTCTTTAAGCAAGCGGGTAAAGTGAACATACAACTTAAAAATGCTACCATCCAGCAGGCGCTGGATGCTTTGTTCACCGAGCATGGACTGGTATACAGCATGATCGACAATATCATTGTTATTAAAAAAGATCCTGCTTTACAAAACAGGGGCGAAGTGGCAGAAAACCCACCGCCTCCCCTGTTAGTTACCGGCCGTGTACTAGATTCCGACGGGAAACCGTTACCCGGTGCATCTGTAAGGATTAAAGGCACAGATAAAGGAGGTACAACTGATGGCAATGGTCATTTCAGTCTTCAACTGACCGGTCCGGGAACGCTGGTTGTTTCATTTGTTGGATTTGAAATAATGGAATTCAGGATTGAGAGATCAATCAACCTGGGCGCCTTCTCACTATCTCCCGAAAAAAGCCAGATGAGTGATGTAGTGGTGGTAGGATATGGTACACAAAAGAAAGCAGATGTTACCGGCGCTATGAGCCGTTTTGATGCTACGGTACTCACAGAAAGACCCATGGCCAGGGTTGACCAGGCACTGATTGGTCAGTTGGCCGGTGTAAGAGTAAAACAAACGAATAGCATACCTGGCAATGGGTTAAGTGTGCAGGGGCGGGGGGCAGGTTCTATAACAGCCGGTAGTGAACCACTGTATGTAATAGACGGCTTTCCATTGGAAATTAGCGCTACCTCTATTGTAAATGGAAGAAGCGGCACCTATGCTTCAGGTAACCCGCTTGACAATATTAACCCTAATGATATTGAATCCATACAGGCGTTGAAAGACGCA
PROTEIN sequence
Length: 307
MAACLQVSAKSYSQRVTLSEKSISIEKALNKIKDQTGCFFFYQHELFKQAGKVNIQLKNATIQQALDALFTEHGLVYSMIDNIIVIKKDPALQNRGEVAENPPPPLLVTGRVLDSDGKPLPGASVRIKGTDKGGTTDGNGHFSLQLTGPGTLVVSFVGFEIMEFRIERSINLGAFSLSPEKSQMSDVVVVGYGTQKKADVTGAMSRFDATVLTERPMARVDQALIGQLAGVRVKQTNSIPGNGLSVQGRGAGSITAGSEPLYVIDGFPLEISATSIVNGRSGTYASGNPLDNINPNDIESIQALKDA