ggKbase home page

SCNpilot_cont_300_bf_scaffold_2398_1

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(3..899)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3G7_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 290.0
  • Bit_score: 256
  • Evalue 3.80e-65
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 290.0
  • Bit_score: 256
  • Evalue 1.10e-65
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AFL50423.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinor similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 290.0
  • Bit_score: 256
  • Evalue 5.40e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAAGCGTCTGGGCAAAGCCATCACGATGTCGCTCGCGGCTCTCGGCTGCGCGATTGCACCTTCCCACGCGGCCGACCCCGTCAAGGTCGGTTTCGTCATGTCGTACAGCGGCTGGTTCCAGCCGATCGACGCCAGCTCCATCAACGGCGCGCTGCTGGCGATCAAGGAGATCAATGCCAAGGGCGGCCTGCTCGGCAGCCAGATCGAAGTCGTCAAGTTCGACAACAAGTCCGAGCCGCCGCTTGGCGCCGACGGGGCGGTCGAAGTCATCGGCAAGGGCGCCAAGGCCATCCTGTTTCCCAGCGATTTCGACTTCGGCGCCCCCGGCGCCTTCATCGCGCAGCAGAGCAATGTCGTGTCGCTGTCCGGCGCGTCCGATCCGAAGTTCGGCGTGACCGGCATCGGGCCCTATGCCTACTCGATCTCCAACGCCGCGCAGTCGCAAGGCGCGTTGCTGGCTGAATGGGCCTACAAGGAGAAGGGCTGGCGCTCGTCCTATGTGCTGCTCGACAACACCATCTCGTTCACCAAGTCACTGTGCGGCAGCTTCAGCAAGCGCTGGAAGGAACTGGCCGGCGATGCCGCGCTTGCCGGGGAGGACACGTTCCTCAATGGCGATCCCAGCGTCTCGGCGCAGGTCACCCGCATCACCAGCCTATCCGCCAAGCCGGACTTCGTCGTCCTGTGCTCCTACGCGCCGGGCGGGCCCAGCGCCATTCGCCAGTTGCGCGCCGCCGGCATCGACCAGCCGATCCTGACCGGTGAATCGATGGACGGGGACTATTGGGCCGGCACCGTTCCCAACCTCAGCAATTTCTTCGTCGCCAATTACGGCTCGACTTATGGCGATGATCCGGATGCAAGCGTCAACGACTTCTTCAAGCGCTACGAGGCC
PROTEIN sequence
Length: 299
MKRLGKAITMSLAALGCAIAPSHAADPVKVGFVMSYSGWFQPIDASSINGALLAIKEINAKGGLLGSQIEVVKFDNKSEPPLGADGAVEVIGKGAKAILFPSDFDFGAPGAFIAQQSNVVSLSGASDPKFGVTGIGPYAYSISNAAQSQGALLAEWAYKEKGWRSSYVLLDNTISFTKSLCGSFSKRWKELAGDAALAGEDTFLNGDPSVSAQVTRITSLSAKPDFVVLCSYAPGGPSAIRQLRAAGIDQPILTGESMDGDYWAGTVPNLSNFFVANYGSTYGDDPDASVNDFFKRYEA