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SCNpilot_cont_300_bf_scaffold_3536_6

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(4859..5398)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDL5_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 179.0
  • Bit_score: 344
  • Evalue 4.90e-92
  • rbh
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 179.0
  • Bit_score: 344
  • Evalue 1.40e-92
  • rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:ESZ27254.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 179.0
  • Bit_score: 344
  • Evalue 6.90e-92

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Taxonomy

Mesorhizobium sp. L2C084A000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCGCCGCAGGACATCAGCAAGCTGATCGTCCGGACCTCGATGAAGGACCGGGCCGCGTTCGATCTGCTCTACCGGCAGACCAGCGCGAAACTTTTCGGCGTCTGCCTGCGTGTCTTGAATGACCGGGGAGATGCGGAAGAAGCGCTGCAGGAAGTCTTCGTCAAGATCTGGACGAAGGCCGATCGCTTTGCCGTGTCGGACCTCAGTCCGATTTCCTGGCTGGTGGCGATCGCGCGCAACCATGCGATCGATCGCATCAGGGCACGCCGGAAGCCGACAGCCGACATCGACGCCGCGCTCGAGGTGGCCGACCCCGCTCCGGGGCCCGAAGCCATGGCGGTCGCGGGCGACGAATCCGAGCGTATCCATCACTGTCTTGAGGAACTCGAGCAGGATCGCGCGGCGGCCGTGCGGGGCGCCTATCTCAACGGCGAGAGCTATGCCGAACTCGCGGAACGCCATGGCGTTCCGCTCAACACGATGCGTACATGGCTGCGCCGCAGCCTGCTTAAATTGCGAGAGTGCCTGGAAAGATGA
PROTEIN sequence
Length: 180
MAPQDISKLIVRTSMKDRAAFDLLYRQTSAKLFGVCLRVLNDRGDAEEALQEVFVKIWTKADRFAVSDLSPISWLVAIARNHAIDRIRARRKPTADIDAALEVADPAPGPEAMAVAGDESERIHHCLEELEQDRAAAVRGAYLNGESYAELAERHGVPLNTMRTWLRRSLLKLRECLER*