ggKbase home page

SCNpilot_cont_300_bf_scaffold_4087_6

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(5552..6175)

Top 3 Functional Annotations

Value Algorithm Source
Fimbiral protein pilA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F203_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 141
  • Evalue 7.30e-31
Pilin {ECO:0000313|EMBL:AFX67151.1}; TaxID=56 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (Polyangium c similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 204.0
  • Bit_score: 150
  • Evalue 2.20e-33
pilA2; fimbiral protein pilA similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 141
  • Evalue 2.10e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGAAGCTGATTGGTCTGAAGAACAGGAAGAATGCGGAGGGCTTCACGCTCGTGGAGCTCATGATCGTCGTCGCCATCATCGGCATCCTGGCCGTGCTCGCGATCTACGGCGTGACCAAGTACATGGCCAACGCGAAGACGGGCGAGGCCCGAAACGCGATCGGTCAGCTCGCGAAGGCGGCCGTCGCTTCGTACGAGGAGGAGCGCATCATGAACGAGCTCCTCGCTCCGGGAACCGCGGGAACCAAGTCTGCCCACGTGATCTGCGCGACGGCGAGCAAGACGGTTCCTGGTGACATCGCCGATGTTGGTAACAAGAAGTATCAGAGCTCGGTCGAGGCCACCAAGGACTGGGCGATCGGGGACCAGATGACGGGTTGGCCCTGCCTCAAGTTCTCGCTCACCGAGCCGCAGTACTTCCTATACGGCTACGAGGCCAGCACCGCCGCGGGCGCCAACGCGTTCGCCGCCTACGCGCAGGCCGACTTCAAGGGTTCGGGCGGCGCCACGAACCAGCTCAGCATCACGGGCAAGCAGCTGGGCGGAGCCAAGCAGATGGTCGTCGATACCGCCATGCGCGAAGACGACGGCGCCGCCGCGGCGACCAAGCGCGCCGTTCCCTGA
PROTEIN sequence
Length: 208
MKLIGLKNRKNAEGFTLVELMIVVAIIGILAVLAIYGVTKYMANAKTGEARNAIGQLAKAAVASYEEERIMNELLAPGTAGTKSAHVICATASKTVPGDIADVGNKKYQSSVEATKDWAIGDQMTGWPCLKFSLTEPQYFLYGYEASTAAGANAFAAYAQADFKGSGGATNQLSITGKQLGGAKQMVVDTAMREDDGAAAATKRAVP*