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SCNpilot_cont_300_bf_scaffold_7251_3

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(1294..1896)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 165.0
  • Bit_score: 144
  • Evalue 1.10e-31
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 165.0
  • Bit_score: 144
  • Evalue 3.10e-32
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99073.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 165.0
  • Bit_score: 144
  • Evalue 1.50e-31

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGCTCGTCGCCTCCGCCGCAAAACCCTCGCCCAGTGGGAACGAGGTCGAGAACGAGGACGACGACGTCCGTCGCAACGAGCAAGGTTCGCTGCGAGAGCGCCTCCGCCGCATTGCAGCGGAGGAGTATGAGTTCATCTGGCGATCGCTGCGGAGACTCGGGGTTCGGCCGCCGGAGACCGATGACGCTGCGCAGCAAGTCTTCGTCATCCTCTCGCCCAAACTGGCGAGTGTCGAACCCGGCAAGGAGCGAAGCTACCTCTTCAGCATCGTCATGCGCGTGGCGAGCGGATATCGACGGCGTCAGGCGAAGCGCCGTGAGGTGTCCGACGAAGCGACCGACTCTTTCCCGGTCGCCCTTCCCTCGCCGGAGGTCGACCTCGATCGGGCATTCGGCCGAGCGATCCTCGACGACATCTTGGCGAGGATGTCCGACGAGCGCCGAGCGGCGTTCGTCCTCGTCGAGCTCGAAGAGCTGACGCTCGCCGCGGCGGCCGAAATCTTGAACGCCCCGATCGGGACGGTGGCGTCGCGAGTGGCCCGTGCGCGGGAGGAACTACGCGCGGCCATCGTTCGACTGCACGCACGTGGGCAGGGAGTCTAA
PROTEIN sequence
Length: 201
VLVASAAKPSPSGNEVENEDDDVRRNEQGSLRERLRRIAAEEYEFIWRSLRRLGVRPPETDDAAQQVFVILSPKLASVEPGKERSYLFSIVMRVASGYRRRQAKRREVSDEATDSFPVALPSPEVDLDRAFGRAILDDILARMSDERRAAFVLVELEELTLAAAAEILNAPIGTVASRVARAREELRAAIVRLHARGQGV*