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SCNpilot_cont_300_bf_scaffold_26314_1

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: 222..1304

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 372.0
  • Bit_score: 264
  • Evalue 2.40e-67
tRNA pseudouridine synthase D n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F2D9_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 372.0
  • Bit_score: 263
  • Evalue 3.80e-67
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 372.0
  • Bit_score: 264
  • Evalue 4.80e-68

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
GTGGACGAGATCCCCGCGTACGAGCCGAGCGGAGAGGGCCCACATCTTTACGTTCGGTTCAAGAAGACGAACCTGACGACGGACGAGGTCGTGAAGGCGTTCGCGCGCGCGCTCCGCGTCGACCGTCGGGACATCGGCGTCGCCGGCCTCAAGGACAAGGTCGGTGTCACGACGCAATGGATCAGCATCCTCGCCGAGGACACGACGCTCGACGAGCGGGTCGCCACGCTCGCGCTCGACGGCGTCGAGCTCCTCGAGCAGCGGCGCCACCGGAACAAGCTCAAGACTGGGCACCTCGACGGCAACCGCTTCACGATCGTCGTCCGCGACATCGACCAGGCTCGCGCCGGCGAGGTCGTGACCGCCCTCGAGCGCATCGGAACCGAGGGTGTCCCCAACGCGTTCGGCTCCCAGCGCTTCGGCTATGACGGCGACACCCACGAGCGCGCCCGCGCATGGCTCACCGGAAAGGAGCGCGCGCCGGGCGACCCGCGCCTCCGCCGGTTCCACTTCTCCGCTCTGCAGTCGGCCATCTTCAACGCCGTCCTCGACCACCGCGTCGAGGACGGGACCTGGAACGTCCCGATCCTGGGCGACCTCCTGAAGAAGGAGGACACGGGAGGGCTCTTCGTCTGCACGGACGTTCAGCTCGATCGTGAACGCGCGAAGAGGGGGGAGGTGTGTCCAACCGGACCCATCGTGGGGGATCGCATGAGGCAGCCCGAAGCTGAAGCGTTCGATCTCGAGCAACGGATCACCTTGCCGCTCATCGAAGGAATCGACCTCCGCCGCGCGCGCTCTCTAGGAGAGGGCACTCGACGACCGCTACGGCTTCGTGTTGCGGAGCTGTCGCATACGCTCGTCGATTCGTCACTTCATGAAGCGGGCTCGTCGCCGGACGTTTCCGGGTCCCCAGGTGTATGCGCCATGACGGTGCGATTCGTGCTACCCAAAGGTGCCTACGCGACGACGGTTCTCTCGAATGCGTTCGCGGTCTTGGACGCCGGTCGACCCAGCGGCTCGAGTGAGCGGCCATACGAACGAGAAGAGCGACAGCTCGCAACACTTACCGAGGAAGAATGA
PROTEIN sequence
Length: 361
VDEIPAYEPSGEGPHLYVRFKKTNLTTDEVVKAFARALRVDRRDIGVAGLKDKVGVTTQWISILAEDTTLDERVATLALDGVELLEQRRHRNKLKTGHLDGNRFTIVVRDIDQARAGEVVTALERIGTEGVPNAFGSQRFGYDGDTHERARAWLTGKERAPGDPRLRRFHFSALQSAIFNAVLDHRVEDGTWNVPILGDLLKKEDTGGLFVCTDVQLDRERAKRGEVCPTGPIVGDRMRQPEAEAFDLEQRITLPLIEGIDLRRARSLGEGTRRPLRLRVAELSHTLVDSSLHEAGSSPDVSGSPGVCAMTVRFVLPKGAYATTVLSNAFAVLDAGRPSGSSERPYEREERQLATLTEEE*