ggKbase home page

SCNpilot_cont_300_bf_scaffold_26414_2

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: comp(658..1353)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJX1_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 146.0
  • Bit_score: 228
  • Evalue 5.10e-57
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 146.0
  • Bit_score: 227
  • Evalue 3.20e-57
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 146.0
  • Bit_score: 227
  • Evalue 1.60e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
TTGCCGAAGCTGTCCAAGAACCGCGAGAAGGTCGAGAAAGCAGTCGACCGCGCTCGCAAATACACGGTCGAGGAGGCGTGCGCGCTCGTCAAGAGCGCGAAGTTCGCCAAGTTCGACGAGACGGTGGACATTGCCGTCCGCTTGGGAGTCAATCCCAAGCACGCTGACCAGATGGTCCGCGGCGCGCTTGTCCTCCCGCACGGCACCGGTCAGACGGTGCGCGTGCTCGTGTTCGCCAAGGGTGAAAAGGAGCGCGAGGCCCGCGAGGCCGGCGCCGATTTCGCCGGAAGCGACGACATGGTTGCGAAGGTGAGCGAAGGATTCATGGACTTCGATCGCGTTATCGCGACGCCCGACATGATGGGCGCCGTCGGTAAGCTCGGTCGCGTCCTCGGTCCTCGCGGCCTCATGCCGAACCCCAAGGCCGCCCCGGTCACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACGCCCGCATCGGCAAGGTCTCGTTCGCCGACAACGCGCTCGCGGACAACGCGAAGGCGCTCATCGCCGCGCTCGTCCGTGCGAAGCCTTCCACCGCGAAGGGCACGTACGTCCGCAGCATCACCATCAGCTCCACGATGGGCCCCGGCGTCAAGGTTGACCCGGGTCAGTTCATCGGCGGGGCGGAGGAAGGCTGATCATGGCCGCAGCATCTTCGACCCGTGA
PROTEIN sequence
Length: 232
LPKLSKNREKVEKAVDRARKYTVEEACALVKSAKFAKFDETVDIAVRLGVNPKHADQMVRGALVLPHGTGQTVRVLVFAKGEKEREAREAGADFAGSDDMVAKVSEGFMDFDRVIATPDMMGAVGKLGRVLGPRGLMPNPKAAPVTXXXXXXXXXXXTPASARSRSPTTRSRTTRRRSSPRSSVRSLPPRRARTSAASPSAPRWAPASRLTRVSSSAGRRKADHGRSIFDP*