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SCNpilot_cont_300_bf_scaffold_30873_3

Organism: SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Location: 1358..2326

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcription regulator n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQS2_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 334.0
  • Bit_score: 417
  • Evalue 1.10e-113
rtcR; sigma-54 dependent transcription regulator similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 334.0
  • Bit_score: 418
  • Evalue 1.40e-114
Sigma-54 dependent transcription regulator {ECO:0000313|EMBL:AFE10285.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Coralloco similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 334.0
  • Bit_score: 418
  • Evalue 6.80e-114

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Taxonomy

Corallococcus coralloides → Corallococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
GTGGCGGTGTCCTCACGAGCACCGGTTCTCCTCACCGGTCCAACCGGAGCGGGGAAGAGCAAGCTCGCACGGCGGATCTTCGAGCTCAAGAAGGCACGCCGGCAGGTCAGCGGCGAATTCGCCGAGGTCAACTGCGCGACCCTCCGCGGCGACGCGGCGATGAGCACGCTCTTCGGACACAAGAAGGGCGCCTTCACGGGTGCGACTGCAGACCGGCCCGGTCTCCTCCTCAAGGCACATCAGGGCGTGTTGTTCCTCGACGAGATCGGCGAGCTCGGTCTCGATGAACAGTCGATGCTTCTCCGGGCGATCGAGGAGAAGGTGTTCTACCCGATGGGCTCGGACCGCGACGCCACGAGCGACTTTCAGCTCCTGTGCGGGACGAACCGAGACCTTCGCGCACGCGTAGCGTCGGGCGATTTCCGCGAGGATCTCTTCGCGCGGATCAATCTGTGGACGTTCCGCCTGCCCGCGTTGCACGAGCGTCCGGAAGACATTCCACCAAACCTCGACTTCGAGCTCCGGCAGGCGTCGCGGACGCTCGGAGTGAACGTCACGATGAACCGTGAGGCGCGCGAGCGCTTCCTCGCCTTCGCATCGGGTTGGACGTGGTCGGGGAACTTCCGTGACCTCAATGCTTCGGTCACGCGAATGGCCACCCTCGCCGTCGGCGGTCGCATCACGAGCGACGTCGTCGCGGCGGAGATCGCACAGGTCCGCGACGGGGCGCCGACGGCGACTGCCGAAGGCCCCGGAGCGGACTTGCTCCTCCGGGTACTCGGAGCCGAGCGCGCCGCTCGCCTCGACCGCTTCGATCGCGGCCGTGGAGCGGCATCGCTCTCCGCCGCCGGGCGAGTCCTCTTCGCGAATTCGAGGTCCGAGCGCCGCAGCGTCAACGACGCAGACCGGCTTCGCAAGTACCTCGCACGGTTCGGCATCGAGCTCGCGGACGTTCGGCGCGCGACGTAG
PROTEIN sequence
Length: 323
VAVSSRAPVLLTGPTGAGKSKLARRIFELKKARRQVSGEFAEVNCATLRGDAAMSTLFGHKKGAFTGATADRPGLLLKAHQGVLFLDEIGELGLDEQSMLLRAIEEKVFYPMGSDRDATSDFQLLCGTNRDLRARVASGDFREDLFARINLWTFRLPALHERPEDIPPNLDFELRQASRTLGVNVTMNREARERFLAFASGWTWSGNFRDLNASVTRMATLAVGGRITSDVVAAEIAQVRDGAPTATAEGPGADLLLRVLGAERAARLDRFDRGRGAASLSAAGRVLFANSRSERRSVNDADRLRKYLARFGIELADVRRAT*