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SCNPILOT_CONT_300_BF_Myxococcales_67_4.9_partial

SCNPILOT_CONT_300_BF_Myxococcales_68_5
In projects: SCNPILOT_CONT_300_BF

Consensus taxonomy: Myxococcales  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_cont_300_bf_UNK

Properties

Avg. coverage: 5.22 Longest contig: 37.89 Kbp Bin length: 9.32 Mbp GC content: 67.91 %
Contigs count: 1703 Features count: 9277 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 38 / 55 MC: 3 BSCG 37 / 51 MC: 7 ASCG 12 / 38 MC: 1
Displaying items 1-50 of 1703 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_300_bf_scaffold_85956
Order: Myxococcales (66.67%)
3 1119 bp 67.02 3.14 114.75
SCNpilot_cont_300_bf_scaffold_46313
Species: bacterium YEK0313 (100%)
2 1270 bp 70.55 2.77 104.88
SCNpilot_cont_300_bf_scaffold_26285
Species: Chondromyces apiculatus (50%)
2 1856 bp 70.91 5.14 103.13
SCNpilot_cont_300_bf_scaffold_58590
Species: Sorangium cellulosum (66.67%)
3 1827 bp 66.83 3.85 102.63
SCNpilot_cont_300_bf_scaffold_47128
Species: Sorangium cellulosum (50%)
2 1775 bp 69.58 4.38 102.25
SCNpilot_cont_300_bf_scaffold_35130
Order: Myxococcales (66.67%)
3 2207 bp 67.47 5.57 102.22
SCNpilot_cont_300_bf_scaffold_39100
Species: Burkholderia cepacia (100%)
2 1997 bp 72.46 4.78 101.25
SCNpilot_cont_300_bf_scaffold_66640
Species: Sorangium cellulosum (50%)
2 1461 bp 71.32 4.47 101.23
SCNpilot_cont_300_bf_scaffold_44535
Species: Sorangium cellulosum (100%)
2 1306 bp 70.67 5.19 100.84
SCNpilot_cont_300_bf_scaffold_43824
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated (100%)
2 1322 bp 59.91 2.66 100.76
SCNpilot_cont_300_bf_scaffold_10609
Domain: Bacteria (60%)
5 5048 bp 66.50 5.52 100.67
SCNpilot_cont_300_bf_scaffold_30614
Species: Sorangium cellulosum (50%)
2 3594 bp 70.59 5.80 100.67
SCNpilot_cont_300_bf_scaffold_32649
Species: Sorangium cellulosum (50%)
6 2312 bp 64.79 4.78 100.56
SCNpilot_cont_300_bf_scaffold_40384
Species: Sorangium cellulosum (66.67%)
3 1400 bp 68.79 3.59 100.50
SCNpilot_cont_300_bf_scaffold_38845
Species: RLO_RIF02_62_27 (50%)
2 1439 bp 51.91 3.49 100.49
SCNpilot_cont_300_bf_scaffold_36023
Species: RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated (66.67%)
3 1514 bp 67.57 3.32 100.46
SCNpilot_cont_300_bf_scaffold_2278
Order: Myxococcales (50%)
8 14003 bp 67.99 5.20 100.37
SCNpilot_cont_300_bf_scaffold_4046
Order: Myxococcales (66.67%)
6 5617 bp 67.54 5.45 100.36
SCNpilot_cont_300_bf_scaffold_47253
Species: Thermoanaerobaculum aquaticum (50%)
2 1253 bp 75.18 5.41 100.32
SCNpilot_cont_300_bf_scaffold_18120
Species: Sorangium cellulosum (66.67%)
3 2330 bp 65.54 4.96 100.30
SCNpilot_cont_300_bf_scaffold_37843
Species: Chondromyces apiculatus (50%)
2 1466 bp 68.35 3.94 100.27
SCNpilot_cont_300_bf_scaffold_19539
Order: Myxococcales (66.67%)
3 2232 bp 65.10 3.82 100.27
SCNpilot_cont_300_bf_scaffold_52356
Species: RBG_13_Deltaproteobacteria_60_28_curated (50%)
2 1155 bp 76.19 5.22 100.26
SCNpilot_cont_300_bf_scaffold_49562
Species: Thioploca ingrica (50%)
2 1209 bp 69.48 4.57 100.25
SCNpilot_cont_300_bf_scaffold_48186
Species: Desulfovibrio vulgaris (50%)
2 1236 bp 65.45 4.47 100.24
SCNpilot_cont_300_bf_scaffold_41363
Species: Sphingomonas taxi (100%)
2 1377 bp 63.83 4.74 100.22
SCNpilot_cont_300_bf_scaffold_37462
Species: Geobacter sulfurreducens (100%)
2 1476 bp 59.69 3.06 100.20
SCNpilot_cont_300_bf_scaffold_59109
Species: Desulfomicrobium baculatum (100%)
2 1006 bp 65.51 4.24 100.20
SCNpilot_cont_300_bf_scaffold_19759
Species: Sorangium cellulosum (50%)
2 2216 bp 64.35 3.74 100.18
SCNpilot_cont_300_bf_scaffold_52465
Species: Chondromyces apiculatus (50%)
2 1153 bp 64.96 5.44 100.17
SCNpilot_cont_300_bf_scaffold_83819
Species: Sorangium cellulosum (50%)
2 1186 bp 68.04 4.23 100.17
SCNpilot_cont_300_bf_scaffold_47951
Species: Sandaracinus amylolyticus (50%)
2 1240 bp 67.34 5.67 100.16
SCNpilot_cont_300_bf_scaffold_47825
Order: Myxococcales (66.67%)
3 1243 bp 68.54 5.45 100.16
SCNpilot_cont_300_bf_scaffold_47469
Species: RBG_13_Chloroflexi_54_8_curated (50%)
2 1249 bp 69.02 4.82 100.16
SCNpilot_cont_300_bf_scaffold_7583
Class: Deltaproteobacteria (66.67%)
3 3780 bp 65.24 5.05 100.16
SCNpilot_cont_300_bf_scaffold_45710
Species: Candidatus Entotheonella sp. TSY1 (50%)
2 1282 bp 63.73 6.07 100.16
SCNpilot_cont_300_bf_scaffold_45439
Species: Chondromyces apiculatus (50%)
2 1288 bp 65.30 5.46 100.16
SCNpilot_cont_300_bf_scaffold_39084
Species: Desulfovibrio desulfuricans (50%)
2 1432 bp 56.35 4.56 100.14
SCNpilot_cont_300_bf_scaffold_38846
Species: Plesiocystis pacifica (50%)
2 1438 bp 73.71 3.84 100.14
SCNpilot_cont_300_bf_scaffold_37776
Species: Sandaracinus amylolyticus (100%)
2 1468 bp 68.39 3.25 100.14
SCNpilot_cont_300_bf_scaffold_29114
Species: R_WOR_2_68_15 (50%)
2 1741 bp 72.77 5.33 100.12
SCNpilot_cont_300_bf_scaffold_25733
Species: Bdellovibrio exovorus (50%)
2 1879 bp 66.79 4.94 100.11
SCNpilot_cont_300_bf_scaffold_24887
Species: Chondromyces apiculatus (50%)
2 1921 bp 64.76 3.79 100.10
SCNpilot_cont_300_bf_scaffold_47052
Species: Stigmatella aurantiaca (50%)
2 2047 bp 69.27 6.01 100.10
SCNpilot_cont_300_bf_scaffold_57830
Species: Sorangium cellulosum (50%)
2 1034 bp 69.63 2.91 100.10
SCNpilot_cont_300_bf_scaffold_22002
Species: Sorangium cellulosum (50%)
2 2074 bp 71.79 5.81 100.10
SCNpilot_cont_300_bf_scaffold_21703
Species: Sorangium cellulosum (50%)
2 2092 bp 65.68 5.64 100.10
SCNpilot_cont_300_bf_scaffold_19965
Order: Myxococcales (50%)
4 2203 bp 72.40 5.92 100.09
SCNpilot_cont_300_bf_scaffold_19861
Species: Chondromyces apiculatus (66.67%)
3 2209 bp 66.32 3.18 100.09
SCNpilot_cont_300_bf_scaffold_13901
Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)
4 4700 bp 66.06 5.07 100.09
Displaying items 1-50 of 1703 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.