ggKbase home page

SCNpilot_cont_300_bf_scaffold_1499_16

Organism: SCNPILOT_CONT_300_BF_Caulobacter_68_7_partial

partial RP 37 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: 15795..16037

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=HFQ_CAUCN similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 3.30e-35
RNA-binding protein, Hfq family similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 9.10e-36
RNA-binding protein Hfq {ECO:0000255|HAMAP-Rule:MF_00436}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cr similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 4.50e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caulobacter vibrioides → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 243
ATGTCGGCCGATAAGAAGCAAAACCTGCAGGACACCTTCCTCAACAGCGTTCGCAAGTCGAAGACCCCGCTGACCATCTTCCTGGTCAACGGCGTGAAGCTGCAGGGCGTGGTCAGCTGGTTCGATAATTTCTGCGTGCTGCTCCGCCGCGATGGCCAGTCGCAACTGGTCTACAAGCACGCCATTTCCACCATCATGCCGTCGCAGCCGGTGCAGCTCTATGAGCCCGGCGAAGACGATTGA
PROTEIN sequence
Length: 81
MSADKKQNLQDTFLNSVRKSKTPLTIFLVNGVKLQGVVSWFDNFCVLLRRDGQSQLVYKHAISTIMPSQPVQLYEPGEDD*