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SCNpilot_cont_300_bf_scaffold_3120_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 11 / 38 MC: 1
Location: 1..900

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Acidovorax sp. CF316 RepID=J1EPV9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 295.0
  • Bit_score: 325
  • Evalue 5.20e-86
branched chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 299.0
  • Bit_score: 420
  • Evalue 1.70e-114
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 295.0
  • Bit_score: 323
  • Evalue 7.20e-86

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
GCCTATATCGGCTGCTTCCAGAGCCCGGTCGGCATCGCCGCCAGCCAGGCCGCCGCCAAATACGACACGCCCTTCCTGATCGATGTCGGTGCCTCCGACCTGATCGTGTCGCGTGGCCTCAAGAACGTGTTCCGGCTGAAGCCGGGCTTCGGCGTCTGCGTCGACGACGGCATCGCCGCACTCGGGACCTTGAACAAGGCCGCGAACGGCGTCGCCAAGAGCGCGGTGATCGTCCACGAGTCGGGAGAATTCGGCACCGGCACGGCGAAGCTTATTGCCGGCAAGCTGCCCTCGATCGGCATCGTGGCCAAGGAGCTGATCGCGCACGACAATCCCACGCGCAACTTCGACAATATTGCGCTCCGCATCCGGTCGCTGGCACCGGACATCGTCGTCATGTCGAACTACGGCAACGAGTACATGCTGCTGGCCCGCACGCTCTTCCAGCAGAAGGTGAATCTCGCGGGCCTCTATTCGTTCCTGGGCGGCGGCTTCAACTACAAGTTCGTCAAGGACATGCCCGACGCCTCGCAATACATGATGGACGTGAACCACTGGTTCAATCCGAAGAGCGCCAAGGCGCAGGACCTGAAGAAGCGCGTCGAGGCGACGGGCGCCTTCTTCACCTTCGAGGTCTATCTCACCTACTCCAACGTCATGCTGCTGGCCGATGCGCTGGAACAGGCGGCTTCGGCCGACAAGGCGAAGCTCACCGCGGCGCTGGCGAATTCGACCTACAAGGCCGATCTCCTGCCCTACGGCCCGACCAAGTTCGTGAACGGCCAGAACCAGGGAGGCCGGCCGGCCGTCCTGCAGGCGCTCAAGGGCGACATCGAAGTGATCGCCCCTGAGGAATTCGCCTCGGCCAAGCCGGTGTTCCCCAAGCCGAAGCTCGGCTGA
PROTEIN sequence
Length: 300
AYIGCFQSPVGIAASQAAAKYDTPFLIDVGASDLIVSRGLKNVFRLKPGFGVCVDDGIAALGTLNKAANGVAKSAVIVHESGEFGTGTAKLIAGKLPSIGIVAKELIAHDNPTRNFDNIALRIRSLAPDIVVMSNYGNEYMLLARTLFQQKVNLAGLYSFLGGGFNYKFVKDMPDASQYMMDVNHWFNPKSAKAQDLKKRVEATGAFFTFEVYLTYSNVMLLADALEQAASADKAKLTAALANSTYKADLLPYGPTKFVNGQNQGGRPAVLQALKGDIEVIAPEEFASAKPVFPKPKLG*