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SCNpilot_cont_300_bf_scaffold_887_25

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(26101..27468)

Top 3 Functional Annotations

Value Algorithm Source
Hchromosomal virulence protein B n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AD38_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 459.0
  • Bit_score: 594
  • Evalue 9.10e-167
  • rbh
AcvB {ECO:0000313|EMBL:KDR87125.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefac similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 459.0
  • Bit_score: 594
  • Evalue 1.30e-166
Type IV secretory pathway, VirJ component similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 459.0
  • Bit_score: 591
  • Evalue 1.70e-166
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGAAGACAAGACATGCCGCATTCCTGACCGCCCTGCTTTCGGCGGCGGCCCTCACGCCTGCGATCGCGCAGGAAAAGAAATTCGATACCGGCATGATCCCCAGCGATCATATCCTGCTGCCGGAGGACGGTGCGGCGAAGGCCAACATCTTCCTGATCTCGGATGCCGGCGGCTGGGGCGATGCCGAGCAGCATGAGGCCGAGGCGCTGGTCGCCAAGGGTGCTGCCGTGGTCGGCATCGATTTCCCCGCCTATATCAAGGCGCTGGCGCAGGACAAGGGCGATTGCGTCTACATGATTTCCGATGTCGAGGCGCTGGCCCAGCAGATCCAGCGCGCCTCCGGCACCAGCGCTTATGCGCCGCCGATCGTCGCCGGCATCGGCGAGGGCGGGGCGCTGGCGCTCGCCATGATTTCCCAGAGCCCGGCGGCGACGCTTGGCGAGGCGGTCGCCGTCGATCCGCAGGCCGGCATTCCGCTGCAGAAGGTGCTCTGCACGCCCGCCGACAAGCAGACGGCGAACGGGCGCACCGTCTACGGCTTTACCGACGGCCCGCTGCCGGCGACCGTCACCATCGCGCTGACGAAGGATGCGCCCAAGGACGGGCGCGAGCATGCGGCGGCTCTGGAAAAAGCGCATAACGACGTCGACCTGACCGACGAGGAGGGCGCCGCCGCTTCCGTCCTGGCGCAGATGCTGGCGGACCGCGTCGATGCCGCCGGCAATACCGACCAGCCGCTCGGCCTGCCGATCAGCATTCTCGAGGCCAAGCCGAAATACGACACCATGGCGGTGATCTATTCCGGCGACGGCGGCTGGCGCGATCTCGACAAGGAAGTCGCCTCGGTCTTGCAGGGGCAAGGGATTCCCGTGGTCGGGGTCGATTCGCTGCGCTACTTCTGGTCGGAGCGCAAGCCGCAGGAGACCGCCGACGACCTGTCGCGGATCATGGATGCCTACCGGCGCGAATGGAACGTCAAGCATGTGCTGCTGATCGGCTATTCCTTCGGCGCCGACGTCTTGCCCGCCACCTACAACCTCCTCTCCGACAAGGACAAGGCGCGCGTGCCGCAGATCACCCTGATGGCGTTGTCGCGGCAGGTGGATTACGTCATTTCCGTCGAGGGCTGGCTGGGTGTCGACGGCGAAGGCAAGGGCGGCGATCCTGTCAAGGACATCGGCAAGATCGACCCGAAGCTGGTGCAATGCATCTACGGCACGGACGAGGACGACGATCCCTGCCCGACGCTGAAGGACAAGGGCGTCGAATCGGTCGCGATCGAGGGCGGGCATCATTTCGACGAGGACTACGAGGCGCTGGCGGCGAAGATCACCACGGCGCTGAAGACGCGGCTGGCGATTCCCTGA
PROTEIN sequence
Length: 456
MKTRHAAFLTALLSAAALTPAIAQEKKFDTGMIPSDHILLPEDGAAKANIFLISDAGGWGDAEQHEAEALVAKGAAVVGIDFPAYIKALAQDKGDCVYMISDVEALAQQIQRASGTSAYAPPIVAGIGEGGALALAMISQSPAATLGEAVAVDPQAGIPLQKVLCTPADKQTANGRTVYGFTDGPLPATVTIALTKDAPKDGREHAAALEKAHNDVDLTDEEGAAASVLAQMLADRVDAAGNTDQPLGLPISILEAKPKYDTMAVIYSGDGGWRDLDKEVASVLQGQGIPVVGVDSLRYFWSERKPQETADDLSRIMDAYRREWNVKHVLLIGYSFGADVLPATYNLLSDKDKARVPQITLMALSRQVDYVISVEGWLGVDGEGKGGDPVKDIGKIDPKLVQCIYGTDEDDDPCPTLKDKGVESVAIEGGHHFDEDYEALAAKITTALKTRLAIP*