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SCNpilot_cont_300_bf_scaffold_1423_25

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(22845..23750)

Top 3 Functional Annotations

Value Algorithm Source
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VLH7_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 301.0
  • Bit_score: 459
  • Evalue 2.30e-126
Signal protein PDZ {ECO:0000313|EMBL:KGE02110.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 301.0
  • Bit_score: 463
  • Evalue 2.20e-127
signal protein PDZ similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 301.0
  • Bit_score: 459
  • Evalue 6.50e-127

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGATATCGACAGCATTCAGCGCTCGATCGTCGCCGTCAGCGCGACGATCCCCGACAACGCATACACCGCAAAGACGCTCGGCACCCACCGCGAAGGCAGTGGGGTGGTCATTCGCGAAAACGGCCTCGTCTTGACCATCGGCTATCTGATCACCGAAGCCACGCAGGTCTGGCTGACACTGCATGACGGCCGCATCGTCGCCGGCCATGCGCTGGCCTATGACCAGGAAACCGGTTTCGGCCTCATCCAGGCGCTCGGCGCCCTCGACGTCCCCCCGGTCAGGTTCGCGGAATCCGCCGCCGTCAAAATCGGCGACAGCGTCACCCTCATCGACGGCAGTCGCCATGCGGTGAAAAGCCGGATCGTGGCGCGGCAGGAATTCGCCGGATACTGGGAATACCTGCTGGACGACGCTCTGTTCATCGCCCCAGCCCACCCCTCCTGGGGCGGAGCGGCGCTCATCGATGCCGAAGGGCGGCTGGTCGGCATCGGCTCGCTGCGGCTGCAGATGAGTCGCGGCGGCGAGGTCGCGGACATCAACATGATCGTGCCGATCGACCTGCTCGCGCCGATCCTCGACGACGTGCTCAACACCGGCCAGGTGAATCGCGCCCCTCGCCCCTGGCTCGGCGCCTTCTCGGCGGAAGCCAGCGGCGGCGTGGTGGTAATGAGCGTCGCCGACCACAGCCCGGCGCAGCTTGCCGGCCTCAAGCGCGGCGACGTCATTTCGGAAATCCGCGACGGTGAAGTCGGCGGCCTTGCCGATTTCTACCGCAAGGTCTGGGACAGCGGCCCGGCCGGCGTCGAAATTCCCATGCGCGTCATTCGCGACGGGCGTGACGCCTGGGTACGCGTCAAATCCGCCGACCGCAACGCCTTCCTGCAGAAGCCGCAGCTTCAGTAA
PROTEIN sequence
Length: 302
MDIDSIQRSIVAVSATIPDNAYTAKTLGTHREGSGVVIRENGLVLTIGYLITEATQVWLTLHDGRIVAGHALAYDQETGFGLIQALGALDVPPVRFAESAAVKIGDSVTLIDGSRHAVKSRIVARQEFAGYWEYLLDDALFIAPAHPSWGGAALIDAEGRLVGIGSLRLQMSRGGEVADINMIVPIDLLAPILDDVLNTGQVNRAPRPWLGAFSAEASGGVVVMSVADHSPAQLAGLKRGDVISEIRDGEVGGLADFYRKVWDSGPAGVEIPMRVIRDGRDAWVRVKSADRNAFLQKPQLQ*