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SCNpilot_cont_300_bf_scaffold_1893_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(5582..5791)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Rhizobium sp. CF142 RepID=J1ST51_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 69.0
  • Bit_score: 116
  • Evalue 1.50e-23
Cold shock protein {ECO:0000313|EMBL:EJJ28438.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 69.0
  • Bit_score: 116
  • Evalue 2.00e-23
cspA; cold shock protein similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 69.0
  • Bit_score: 114
  • Evalue 1.20e-23

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGAACACAGGCACCGTAAAGTTTTTTAACGGCACCAAGGGTTTCGGCTTCATCGCCCCGAACGATGGCGGCAACGACGTATTCGTGCATATCACTGCTGTCGAGCGCGCCGGCCTTCGCTCGCTTAGCGAAGGGCAGACCGTGCAGTACGATCTCGTACAGGATCGTCGCTCGGGCAAGTATGCCGCAGACAATCTGCGCGCTGCTTGA
PROTEIN sequence
Length: 70
MNTGTVKFFNGTKGFGFIAPNDGGNDVFVHITAVERAGLRSLSEGQTVQYDLVQDRRSGKYAADNLRAA*