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SCNpilot_cont_300_bf_scaffold_1527_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(13141..15081)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0110 family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IIB0_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 651.0
  • Bit_score: 569
  • Evalue 4.40e-159
Uncharacterized protein {ECO:0000313|EMBL:KJS08456.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 646.0
  • Bit_score: 755
  • Evalue 8.00e-215
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 651.0
  • Bit_score: 569
  • Evalue 1.30e-159

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Taxonomy

Hoeflea sp. BRH_c9 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
ATGAACCGCGAATTCCTGGAATTCTACGACCGCGAACTGAAAATCCTCTATGAGCGCTCGCAGGAATTCGCCGAGGAATTTCCGGGCGTCGGCAAGCGGCTGGGAGCGCTGACCGAAGAGAAGATCGACCCCGCCATCGGCGGCTTGCTGGAAGGCGCCGCCTTCATGGCCGCGCGCGTGCAGCTGAAGCTGAAAAGCGAATTCGACACCTTCACCGTCGAGCTGATCGAGCAGCTGCTGCCCGGCTTCCTCGCGCCGACGCCCTCGTTCGCCATTGCCCAGGCGCGGCCGGATTATGCCAATCCGGCGCTGAAGAACGGCATGCGTCTCAAGGCCGGGCAATATATCGAGACCGCCTTCATGGAGCGCGAGCGCCGCGTCGCCTGCCGTTATCGGCTGGTGTCGGATATCCATCTCTGGCCCTATGCGGTTGCCTCGGCCAGTTACCATCCCTCCGCCGCGCCGCTGCAGGCGCAGGGCTTCGATTGCGGCCCGACGGTCGCCTCGGGGCTGCAGATCGATCTCGAACTGCGCGACAATGCCGAGGGCCAGCCGCGCGCGGCCGATCTCAAGGTTTCCGCCTCGCCGGCCGACGAATTCACCTTCCACCTCACCGGGCCGATGAGTGATGCGGTGTCGCTGTGCGAGCAGGTGTTTTCGCGGCTGGAAAAGGTGGCGATCCGCTATCTCAACGCGGCGGGCGACCCGCGTTTCATCCTTGTCGATCCCGCAAGCATCGAGCCGGTTGGCTTCCGGCGCGGGGAATCGCTGTTTTCCCATGACAACCGCTTTTTCGGCGGCTTCAACCAGTTGCGCGAATATTTCGCGTTTACGGCCGAATATCTGGGCTTTCGCATTTGCGGGCTGGAGCGGCTGCTGAAAAACGTCGATGCCTCGGGCGTCTCGCTGCTCTTGGCCTTTTCCGATGTCGTGCCGCGCCTTGCATCGATGGTGAAGGGGGCCTGGTTCGCGCTCTATGCGGCGCCGGTGACCAATCTGTTCGACATGGTCTGCGCGCCCGTGCCGGTGCGCAGCCAGGAGGACGAATTTCCGGTCATTCCCGACCGCAGCCGCACGCTGGATTACGAGGTCTACAAGATCCTCGACGTCACGGCGCAATTGCCGCGCAGCAAGGAAGCGGTGCGGGTCTTCCCGCTCTATTCCGCCCCGACAGACAATGTGCCGCTGGCGCATGCGCCCTATTATTCGGTGCGGCGACTGGAGCGGCAGCGCACCAATCGCGAACGCCGCTTCGGCATGCGCAGCACCTATCTCGGCACAGAAACCTTTTTGTCGCTGCGCGAGCCGCCCGGCGGCATCGACGGCGAACATGTGCGCACGCTGAACGTGCGGGCGCTGGTCACCAACCGCCATCTGACCGACCAGTTGCCGGTTCGGCGCGGCAGCCCGGATTTCTTCCTGCTCGACGACACCACCATCCAGTTCGATTGCATCGCCGGGCCGACGCCGCCGCGCGAATCCGTGCTGGTCGGGGCGCGGCGCGGCAAGAGCAGCGAGTCCACCGGCGCACTCCTCTGGAAGCTGGTCAGCCTGCTGCAGTTCAATCATCTCGGCCTTGCCTCGCGCCCCGGCAAGCAGCCGGTCAATGCGCTGCAGGAATTGCTGATGGTGTTTTCCGACACCGCCAATGCCTTCATCGAACGCCAGATCAGAGGCATCCTCGATGTCGCCGTGCAGCCGGCGGTGCGCAAGGTGCGCCTGCAGGATCGCTATGCGGTGGCGCGCGGGCTGGAAGTGACGGTGACGCTGGACGAAAACGCCTTCGAGGGGCAGGGCGCTTTCCTGATGGGCATGGTGCTCAGCCGTTTCCTTAACGAATATGCCGGCCTCAACAGTTTCGTCGAAACCGTGATCGTCTCCAAGCAGCGGGACCTGCTGAAACGCTGGCCGCCGGAAATCGGCGAAAGGGCCGCGCTATGA
PROTEIN sequence
Length: 647
MNREFLEFYDRELKILYERSQEFAEEFPGVGKRLGALTEEKIDPAIGGLLEGAAFMAARVQLKLKSEFDTFTVELIEQLLPGFLAPTPSFAIAQARPDYANPALKNGMRLKAGQYIETAFMERERRVACRYRLVSDIHLWPYAVASASYHPSAAPLQAQGFDCGPTVASGLQIDLELRDNAEGQPRAADLKVSASPADEFTFHLTGPMSDAVSLCEQVFSRLEKVAIRYLNAAGDPRFILVDPASIEPVGFRRGESLFSHDNRFFGGFNQLREYFAFTAEYLGFRICGLERLLKNVDASGVSLLLAFSDVVPRLASMVKGAWFALYAAPVTNLFDMVCAPVPVRSQEDEFPVIPDRSRTLDYEVYKILDVTAQLPRSKEAVRVFPLYSAPTDNVPLAHAPYYSVRRLERQRTNRERRFGMRSTYLGTETFLSLREPPGGIDGEHVRTLNVRALVTNRHLTDQLPVRRGSPDFFLLDDTTIQFDCIAGPTPPRESVLVGARRGKSSESTGALLWKLVSLLQFNHLGLASRPGKQPVNALQELLMVFSDTANAFIERQIRGILDVAVQPAVRKVRLQDRYAVARGLEVTVTLDENAFEGQGAFLMGMVLSRFLNEYAGLNSFVETVIVSKQRDLLKRWPPEIGERAAL*