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SCNpilot_cont_300_bf_scaffold_4697_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 3299..4840

Top 3 Functional Annotations

Value Algorithm Source
Xylose import ATP-binding protein xylG n=2 Tax=Ochrobactrum intermedium RepID=C4WM65_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 506.0
  • Bit_score: 828
  • Evalue 4.20e-237
Monosaccharide ABC transporter ATP-binding protein, CUT2 family {ECO:0000313|EMBL:EYR78662.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 513.0
  • Bit_score: 938
  • Evalue 5.30e-270
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 514.0
  • Bit_score: 826
  • Evalue 4.50e-237

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGAGCGCCGTCGCTGAAACCGGTCACAAGGGTGAAGTGGTGCTGGCCGCGCGCAACGTGGCGAAGTCCTACGGTAGCGTCCATGCCCTCAAGGGCGTCAATTTCGACATTCATCGCGGCCAGGTGACCACCCTGTTCGGCGAGAACGGCGCCGGCAAGTCGACGCTGATGAAAATTCTCTCCGGCGTGGTGACGCCTACTTCAGGCGAAATTATTCTCGATGGGGAACCCGTCTCCTTCGCGTCGTCCTCCCAGGCCCGCGATCGCGGCATCTCCATCATCCATCAGGAACTCAGCCTCGCGCCGAACATGAACGTTCGCGACAACATCTTCATGGGTCGCGAGATCATGATGGCGACGGGCGTGGATTTTGCTGAGGAGGAGCGCCAGACGCGCCTGCTGATGGCCGAGCTGGAAGAGGATATCGATCCGCTCACCCCGGTCGAGGATCTGCGCCTTGGCCAGCAACAGATCGTCGAGATCGCCCGCGCCCTGTCGGTCAATTCGCGCATCCTGATCATGGACGAGCCGACCTCGGCGCTCTCGGCCTCGGAAGTCGAAGTGCTGTTCAAGGTCATCCGCGACCTCACCAATCGCGGCGTCTCCATCGTCTATATCTCGCATCATCTGGAAGAAGCGCTGCAGATCACCAACCACGCGGTGGTGCTGCGCGACGGCGCGATGACGGCCTATGCGGAGCGCAAGGACATCGATCTCGAATGGATCGTGCGCCACATGGTCGGCGACAATTTCGATCTCGGCTCGCCGCCGACCGGTTATGACAAGGGCGAGGTATCGCTCTCCATCGAGGGGCTGACGGTGCCCGATCCCGGCGGCGCCGGCTATGCGGTGGTGGACGACCTGTCGCTTGCGGTGCGCGCCGGCGAGATCGTCTGCATCTACGGCCTGATGGGCGCCGGGCGCACCGAATTGCTGGAGACGGTCGCTGGCCGCCTGAAGGCGACGGCCGGCAGGGTCCTGCTCAAGGGCCGCGACGTCACCGGCCAGACGATTGCCCAATGCATTCGCGACGGCCTCGTGCTCGTCCCCGAAGACCGGCAGCGCGACGGGCTGGTGCAGACCATGACCGTCGGCCGCAACCTGTCGCTCGCCAATATCGGCGCGTTCACGCGCGGCCTGTTCACCTCGGCGGCCCGCGAGCTGGATCTGGTCGGCGATGCGATCCGCAAGGTGCATATCAAGACCGATGGCGGCGGCGCGGCCATCGGCTCGCTGTCGGGCGGCAACCAGCAGAAGGTGGTGATCGGCAAGATGCTGGCGACCGACCCGGAGGTCATCCTGCTCGACGAACCGAGCCGCGGCATCGACATCGGCGCCAAGGCGGAAGTCTTCAAGCTGCTCGCCGAGCGCGCCCGCCAGGGGCTCGCCGTCGTCTACACCACCTCGGAAGTCGGCGAATGCCTGAGCATCGCCCATCGCATCATCGTCATGCGGCGCGGCCGCATCTCCGCAGAATTCGGTCCTGACGCGACCAAGGAACAGATCATGGCCGCCTCCGGCGAAGCCGTGCATGCCCATTAG
PROTEIN sequence
Length: 514
MSAVAETGHKGEVVLAARNVAKSYGSVHALKGVNFDIHRGQVTTLFGENGAGKSTLMKILSGVVTPTSGEIILDGEPVSFASSSQARDRGISIIHQELSLAPNMNVRDNIFMGREIMMATGVDFAEEERQTRLLMAELEEDIDPLTPVEDLRLGQQQIVEIARALSVNSRILIMDEPTSALSASEVEVLFKVIRDLTNRGVSIVYISHHLEEALQITNHAVVLRDGAMTAYAERKDIDLEWIVRHMVGDNFDLGSPPTGYDKGEVSLSIEGLTVPDPGGAGYAVVDDLSLAVRAGEIVCIYGLMGAGRTELLETVAGRLKATAGRVLLKGRDVTGQTIAQCIRDGLVLVPEDRQRDGLVQTMTVGRNLSLANIGAFTRGLFTSAARELDLVGDAIRKVHIKTDGGGAAIGSLSGGNQQKVVIGKMLATDPEVILLDEPSRGIDIGAKAEVFKLLAERARQGLAVVYTTSEVGECLSIAHRIIVMRRGRISAEFGPDATKEQIMAASGEAVHAH*