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SCNpilot_cont_300_bf_scaffold_1433_21

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

near complete RP 50 / 55 MC: 4 BSCG 48 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(22842..23816)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR69_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 324.0
  • Bit_score: 593
  • Evalue 1.10e-166
  • rbh
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 324.0
  • Bit_score: 593
  • Evalue 3.10e-167
Type II secretion system protein {ECO:0000313|EMBL:ABE61278.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 324.0
  • Bit_score: 593
  • Evalue 1.50e-166

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGAACTTGCAGACCCTCGCACTGGCATTCATGGCTGCGACCGCCGTGGGCGGAATCGCATGGGTCTTCCTGTATCCGGCGCTGTCGGGGGAGGCGAAGGCCGAAAAGCGCCGCGCCGCGTTCGCGCGGACGACGCCGGCGGTCCGTCAGGTCGACAGAGCCCAACGCTCGCGCCGCGAGCAAATTGAAGGATCGCTGCGGGAAATCGAACAACGCAGCAAGCGCAACAGCAAGGTCGCGCTCAGCAGCCAAATCGCACAGGCCGGTCTGTCCTGGTCGAAGGAGAAGTTTCTGATCATCTCAGGAATTTTCGCCGCTGTTTGTTTCGTCGTTCCGATGTTTCTGGGAGCCGGGCCAATTGCCGCGGTCGGCCTGGCGTTCGCGGCAGGATTCGGCCTGCCGCGCTGGCTGCTGGGCTTCCTCAAGAAGCGCCGCGAGAAGGCATTTCTGCGCGCGCTTCCAGATGCGGTCGACGTGATCGTCCGTGGCATCAAGGCCGGCATGCCCCTGTTCGAATCGCTGAAGGTGGTGGCGGCCGATTCGCCGGAGCCGCTGAAAAGCGAATTCGCCGCGATCATCGAGACGCAGGCGATCGGCATGCCGCTGGGCGATGCCTGTTCGCGGCTGTACGAGCGGATGCCGGTTCCTGAAGCGAACTTCTTCGGCATCGTGATCGCGATCCAGCAGAAGTCCGGCGGCAACCTGTCGGAAGCGCTCGGCAATCTGTCCAAGGTGCTGCGCGACCGCAAGAAGATGGCCGAGAAGATCCAGGCCATGTCGATGGAGGCCAAGGCGTCTGCTGCGATCATCGGCTCGCTGCCGCCGGTCGTCATGCTGCTCGTCTATCTGTCCACGCCGGACTACATCGCGCTGCTGTGGACCCATCCCACCGGACGGCTAATGCTGGCCGGCTGCGTGATATGGATGTCGACCGGCATCTACGTGATGAAAAAAATGATCAATTTCGACTTCTGA
PROTEIN sequence
Length: 325
MNLQTLALAFMAATAVGGIAWVFLYPALSGEAKAEKRRAAFARTTPAVRQVDRAQRSRREQIEGSLREIEQRSKRNSKVALSSQIAQAGLSWSKEKFLIISGIFAAVCFVVPMFLGAGPIAAVGLAFAAGFGLPRWLLGFLKKRREKAFLRALPDAVDVIVRGIKAGMPLFESLKVVAADSPEPLKSEFAAIIETQAIGMPLGDACSRLYERMPVPEANFFGIVIAIQQKSGGNLSEALGNLSKVLRDRKKMAEKIQAMSMEAKASAAIIGSLPPVVMLLVYLSTPDYIALLWTHPTGRLMLAGCVIWMSTGIYVMKKMINFDF*