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SCNpilot_cont_300_bf_scaffold_643_4

Organism: SCNPILOT_CONT_300_BF_Plasmid_66_13

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 11050..12282

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL54_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 383.0
  • Bit_score: 571
  • Evalue 9.70e-160
  • rbh
HlyD family type I secretion membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 383.0
  • Bit_score: 571
  • Evalue 2.70e-160
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:ACS21205.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 383.0
  • Bit_score: 571
  • Evalue 1.40e-159

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGATTGCCCGAGCCGGATTCATATCCGCCCTGCGCGGCTCATCGTCTGACGGGCATGTTACGAGTTTGCCCGACTTGACCGATCTCAACGAAACGCGGGCCACGCGGTCAACCCGTGTCATCTGGCTGGTCGCCCTGTTCCTGGTGATCTTCTTTGCCTGGGCCTGGTTCTTCGAGATCGACGAGGTGTCGAGCGGCACCGGCAAGGTCATTCCCAGCTCGCGCGAACAGGTGATCCAGACCCTGGAAGGCGGCATCCTGTCGAAGCTCAACGTCCGCGAGGGCCAGCTTGTCGAGAAGGGGACGGTACTCGCTCAATTGGACCCGACGCGCGGTGAATCGAGCGTCGAGGAAACGGCCGCGCGCTATCGTGCCGCGCTGGCGGCGAGCGCCCGTTTGCAGGCCGAAGTGGCGGGGAACTCCGGCATCGCCTTCCCATCGGAACTGGATAACTGGCCGCAGCTCAAAGCGACCGAGACGGCGCTGTTCCAGTCCCGGCGCGCCAGCCTCAACGAAACGGTGAGCGGTCTCAATCAGGCGCTGGTCCTCGCCCGGCGCGAACTGGGCATCACCCAATCGCTGATGGCGAGCGGGGCTGCGAGCAATGTCGAGATGATCCGCCTGCAGCGTCAGGTGGCCGATCTCGAGCTGAAACTGAGCGAGGCGCGCTCGGCCTATATGGTCAAGAGCCGCGAGGATCTGACCAAGGCCGATGCCGATGTGAAATCGCTGCAATCGGTGGTGCGGGGGCGCGAGGACACGCTCGACCGCACGACCCTTGTCGCGCCGGTGCGCGGCATCGTGAAAAGCCTCAACGTGACGACGATCGGCGGTGTGGTCCCGCCTGGCGGTTCGGTGATGACGCTGGTGCCGATGGGTGACCAGCTCCTGGTCGAAACGCGGATCTCACCGCGCGACATCGCCTTCATCCACCCCGGCCAGAGCGCGATGGTGAAGGTTACGGCCTATGACTATTCGATCTATGGCGGCCTGGAAGCCAAGGTCGAGACGATCACGCCCGATACGCTGCGTGACGAGGTCAAACCCGAGATCGTCTATTACCGGGTTCTCATACGCACCAGTTCCGATGCGCTGACCGACAAGGCCGGCCGTCGCCTGCCGATCACGCCGGGCATGGTGACGACCGCCGACATCCGCACCGGCCGCAAGACCGTGTGGGACTATCTGACCAAACCCCTGAACAAGGCGCGCGAAGCGATGCGCGAGCGCTGA
PROTEIN sequence
Length: 411
MIARAGFISALRGSSSDGHVTSLPDLTDLNETRATRSTRVIWLVALFLVIFFAWAWFFEIDEVSSGTGKVIPSSREQVIQTLEGGILSKLNVREGQLVEKGTVLAQLDPTRGESSVEETAARYRAALAASARLQAEVAGNSGIAFPSELDNWPQLKATETALFQSRRASLNETVSGLNQALVLARRELGITQSLMASGAASNVEMIRLQRQVADLELKLSEARSAYMVKSREDLTKADADVKSLQSVVRGREDTLDRTTLVAPVRGIVKSLNVTTIGGVVPPGGSVMTLVPMGDQLLVETRISPRDIAFIHPGQSAMVKVTAYDYSIYGGLEAKVETITPDTLRDEVKPEIVYYRVLIRTSSDALTDKAGRRLPITPGMVTTADIRTGRKTVWDYLTKPLNKAREAMRER*