ggKbase home page

SCNpilot_cont_300_bf_scaffold_6665_curated_4

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: 3484..4860

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 455.0
  • Bit_score: 691
  • Evalue 5.90e-196
lysA; diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 452.0
  • Bit_score: 661
  • Evalue 1.50e-187
diaminopimelate decarboxylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003708B9E similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 457.0
  • Bit_score: 707
  • Evalue 7.40e-201

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGCCGGACGACGCGAACGCGCTCGACCCGGCCATCTGGCCGGCGTCCGCCGCGCGCGACGAGGCGGGCGTCCTGTCGATCGCGGGCGTCGACGTCGGCGATCTGCGCGACGCGTTCGGCACACCGCTCTACGTCTTCGACGAGGACGAGGTGCGCGCGCACGCGCGGCGCGCCGTTGCGGCGTTCCGCGACGCGGCCGCGGCGCACGGGGTCGCTGCCCGCGTCTACTACGCCGGAAAGGCGTTCCTCTCCACCGAGGTCGTCCGCTGGGTCACCGCCGAGGGCCTCGCGATCGACGTGTGCAGCGGCGGCGAGCTGGAGGTCGCGCTCGCGGCCGGAGTCGATCCCGGCCGCATCGGCTTCCACGGCAACAACAAGAGCGTGGCCGAGCTCGCACGCGCCGTGGAGGTGGGTGTCGGCTCCGTCGTGATCGACAGCGCGATCGAGCTCGAGCGCCTCGCGGCGATCGTCGAGCGGCGGCGCGTCGTGGCACCGGACGCGGTGCAGCCCGTCCTGCTCCGCGTGAACAGCGGTGTCCACGCCGAGACGCACGACTTCCTCGCCACCGCGCACGAGGACCAGAAGTTCGGCTTCGCGCTGGAGGATGCCGCGGCCGCCGTCGCCCGCATCCGCGAGCTCGACGCGCTCGCCTTCGTCGGGCTGCACTGTCACATCGGCTCGCAGATCTTCGGGACGGACGGCTTCGCCGAGTCGGCGTCGCGCCTCGTCGAGCTCCACGCCGCCCTCAGCGAGGACGGAGAGGTGCCGGTCCTGAACCTCGGCGGCGGCTTCGGCATCGCGTACACGTCCGCGGACGACCCGACCCCGATCGAAGCGCTCGCCGCCGGGATCGTCGACGCCGTCGCCCGGGAGTGCGCGGTGCGCGGCATCCCGATGCCGAACCTCGCATTCGAGCCGGGGCGGGCCATCGTCGGTCAGGCGGGCGTCACGCTCTACGAGGTGGGCACGGTCAAGCCCGTGCGTCTCGGCGACGGCGCGGAGCGCGTGTACGTGAGCGTCGACGGCGGCATGAGCGACAACCCGCGCCCCGCTCTCTACGGTGCGCAGTATTCGGCCCGCATCGCGTCGCGCGTCTCGGGCGCTGCGCCGGTGCTGGCCCGTGTCGTCGGCAAGCACTGCGAGTCGGGCGACATCGTCGTCGATCACGAGTACCTGCCCGGGGACGTCGCGCCCGGCGACCTGCTCGCGGTGCCGGCCACGGGCGCGTACTGCTTCTCGCTCGCGAGCAACTACAACTACCTCGCGCGCCCGGCCGTCGTCGCCGTGCGCGCCGGTCAGGCCCGCGTCATCGTGCGCGGAGAGACGATCGCCGACCTCCTCTCGCGGGACGCCGGCATCGCGGAAGGGAACGCATGA
PROTEIN sequence
Length: 459
MPDDANALDPAIWPASAARDEAGVLSIAGVDVGDLRDAFGTPLYVFDEDEVRAHARRAVAAFRDAAAAHGVAARVYYAGKAFLSTEVVRWVTAEGLAIDVCSGGELEVALAAGVDPGRIGFHGNNKSVAELARAVEVGVGSVVIDSAIELERLAAIVERRRVVAPDAVQPVLLRVNSGVHAETHDFLATAHEDQKFGFALEDAAAAVARIRELDALAFVGLHCHIGSQIFGTDGFAESASRLVELHAALSEDGEVPVLNLGGGFGIAYTSADDPTPIEALAAGIVDAVARECAVRGIPMPNLAFEPGRAIVGQAGVTLYEVGTVKPVRLGDGAERVYVSVDGGMSDNPRPALYGAQYSARIASRVSGAAPVLARVVGKHCESGDIVVDHEYLPGDVAPGDLLAVPATGAYCFSLASNYNYLARPAVVAVRAGQARVIVRGETIADLLSRDAGIAEGNA*