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SCNpilot_cont_300_bf_scaffold_12314_curated_12

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: comp(13651..15156)

Top 3 Functional Annotations

Value Algorithm Source
Capsular polysaccharide synthesis enzyme n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CP66_CLAM3 similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 464.0
  • Bit_score: 370
  • Evalue 2.30e-99
Secrted polysaccharide biosynthesis protein {ECO:0000313|EMBL:EZP27469.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 466.0
  • Bit_score: 373
  • Evalue 3.90e-100
wcoI; capsular polysaccharide synthesis enzyme similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 464.0
  • Bit_score: 370
  • Evalue 7.40e-100

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Taxonomy

Microbacterium oleivorans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1506
GTGACAGACGTGAAGCCTCAGGTGACCCCGTCGCGGCTGCTGGGCGTCCTGCTGCGGGGATGGTGGATCCTCCTCGTCGCGGCCGTCCTCGGCGGCGGTGTCGCGTACGGGTACTCCAGCCTGCAAGCGCCGATCTTCCAGTCGACGGCATCGACGTACTTCTCCATGAAGTCGGCGTCGAGCGGGTCGGACATCAACCAGGGCTCGGCCTACACGCAGAACCAGATGCTGTCCTTCGCCCAGCTCGCGATGTCGTCGATGGTGCTCGACAAGGTGCGCGCAGACCTGAACCTCGATCTGACCAATGCTCAGTTGCGGAACATGACGTCGGTGTCGATCCCGCAGAACACCGTGATCCTCGACATCTCCGCGGCATCCACCGACAAGCAGTTCGCCGCGGACCTCGCCAACAGCATCTCCTCGAACCTGGCGTCAGAGGTGGAGGTCATCGCGCCGCGCGATGACGCAGGGAAGGCCACGATCGTGGCGCGCGTGATCGAGCCGGGCGTGCCCGCGGTCTACCAGAGTTCGCCGAACAAGTCGCGCGACGCCGTGCTGGGCGGCATCGCGGGCCTGCTCATCGCCGCTCTGGCCCTCACGATCTGGGCGCTGCTCGACACACGCGTCCGCTCGGAGGACGTCCTGCGGCGGATCACCGAGCTGCCCGTGCTGGGCGCGGTGCCGTCGCGCAAGGACAATGGGCGCCGCCCTATCGTCGTCTCCGAGCCCAACGGCGCCGGGGCCGAGGCGCACCGCGGCGTGCGGTCTAGCTTGAGGTTCTCCGCGGTAGGACACGAGATCACCACGATCGCCGTGACGTCGTCCATCCCGGGCGAGGGGAAGACGACCGTCGCCATCAACCTGGCTCTCACCTATGCCGAGGCGGGCGTCCGCGTGCTGCTGGTCGACGCCGACCTGCGGCGTCCGATGGTCGCGCAGTCCCTGGGTCTCGAGAACTCCGTCGGGCTCACGACCATGCTCGTGGGAGCGGTCGGGTTCGACGACGCCAAGCTCCCATGGGGAGACACGCGCCTCTGGGTCCTCCCCGCGGGCGTGGTCCCGCCCAACCCGGCGGAGCTGCTCGCCTCGGAGCGGATGGCCGAGATCCTCCGGGACCTCCGCACGGACTTCGACGTCATGGTGGTCGACACGGCCCCGCTGCTCTCCGTGGCGGATGCCACCATCATCGCGCCGCTCGTCGACACCACGATCGTCGTCGCCGATGTCACGAAGGTCCGCATCGCACAGCTCACCCGCGCCCTCTCCACTCTGACCGCGGTGCGCGCCCAGATCGCGGGCGTCGTGTTCAACCGGGTGCGCCGCGGCCGTCGCGACGACTACCGCTACTACTACAGCCCGACCGCCGAGCGCGCGACGACGCGACGCAAGCTCCGCCGTCGCGCTGTCGCCGACGCGGCGCCCACGGCGACCCCGGCCGTCGAGGCTTCGAAGAAGGCCAAGGGCAAGGGCAAAGGCCAGACCCCGGACGAGGTCGCCGAGCCCTAG
PROTEIN sequence
Length: 502
VTDVKPQVTPSRLLGVLLRGWWILLVAAVLGGGVAYGYSSLQAPIFQSTASTYFSMKSASSGSDINQGSAYTQNQMLSFAQLAMSSMVLDKVRADLNLDLTNAQLRNMTSVSIPQNTVILDISAASTDKQFAADLANSISSNLASEVEVIAPRDDAGKATIVARVIEPGVPAVYQSSPNKSRDAVLGGIAGLLIAALALTIWALLDTRVRSEDVLRRITELPVLGAVPSRKDNGRRPIVVSEPNGAGAEAHRGVRSSLRFSAVGHEITTIAVTSSIPGEGKTTVAINLALTYAEAGVRVLLVDADLRRPMVAQSLGLENSVGLTTMLVGAVGFDDAKLPWGDTRLWVLPAGVVPPNPAELLASERMAEILRDLRTDFDVMVVDTAPLLSVADATIIAPLVDTTIVVADVTKVRIAQLTRALSTLTAVRAQIAGVVFNRVRRGRRDDYRYYYSPTAERATTRRKLRRRAVADAAPTATPAVEASKKAKGKGKGQTPDEVAEP*