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scnpilot_dereplicated_Microbacterium_2

scnpilot-dereplicated_Microbacterium_70_1
In projects: scnpilot-dereplicated  |  SCNPILOT_CONT_300_BF

Consensus taxonomy: Microbacterium  →  Actinomycetales  →  Actinobacteridae  →  Actinobacteria  →  Bacteria

Metagenomic Context

Auto curated genome
Original version: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

Properties

Avg. coverage: 1.00 Longest contig: 147.89 Kbp Bin length: 2.93 Mbp GC content: 70.14 %
Contigs count: 598 Features count: 3238 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Displaying items 451-500 of 598 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_300_bf_scaffold_57385_curated
Species: Microbacterium laevaniformans (50%)
2 979 bp 70.68 1.00 78.75
SCNpilot_cont_300_bf_scaffold_58731_curated
Species: Microbacterium mangrovi (50%)
2 955 bp 70.37 1.00 98.64
SCNpilot_cont_300_bf_scaffold_42880_curated
Species: Microbacterium sp. UCD-TDU (50%)
2 2095 bp 70.21 1.00 89.21
SCNpilot_cont_300_bf_scaffold_54747_curated
Species: Microbacterium testaceum (50%)
2 1093 bp 72.83 1.00 91.67
SCNpilot_cont_300_bf_scaffold_39158_curated
Species: Microbacterium azadirachtae (100%)
2 1392 bp 74.14 1.00 96.12
SCNpilot_cont_300_bf_scaffold_40767_curated
Species: Microbacterium sp. C448 (50%)
2 1358 bp 71.80 1.00 99.41
SCNpilot_cont_300_bf_scaffold_75421_curated
Species: Corynebacterium doosanense (50%)
2 1120 bp 71.25 1.00 100.18
SCNpilot_cont_300_bf_scaffold_63141_curated
Species: Microbacterium hominis (100%)
2 1701 bp 65.61 1.00 88.89
SCNpilot_cont_300_bf_scaffold_43897_curated
Species: Microbacterium ginsengisoli (50%)
2 1285 bp 74.86 1.00 98.75
SCNpilot_cont_300_bf_scaffold_57548_curated
Species: Microbacterium mangrovi (100%)
2 1017 bp 69.03 1.00 100.00
SCNpilot_cont_300_bf_scaffold_55886_curated
Species: Microbacterium foliorum (50%)
2 1573 bp 71.96 1.00 97.27
SCNpilot_cont_300_bf_scaffold_52476_curated
Species: Microbacterium azadirachtae (100%)
2 1109 bp 71.51 1.00 99.82
SCNpilot_cont_300_bf_scaffold_46448_curated
Species: Microbacterium testaceum (50%)
2 1206 bp 72.80 1.00 99.25
SCNpilot_cont_300_bf_scaffold_35983_curated
Species: Microbacterium mangrovi (50%)
2 1454 bp 68.84 1.00 90.58
SCNpilot_cont_300_bf_scaffold_25218_curated
Species: Microbacterium testaceum (50%)
2 1892 bp 75.05 1.00 98.47
SCNpilot_cont_300_bf_scaffold_57703_curated
Species: Microbacterium sp. C448 (50%)
2 1032 bp 71.51 1.00 98.84
SCNpilot_cont_300_bf_scaffold_13729_curated
Species: Microbacterium testaceum (50%)
2 2700 bp 67.78 1.00 96.33
SCNpilot_cont_300_bf_scaffold_47050_curated
Species: Microbacterium oleivorans (50%)
2 1236 bp 71.36 1.00 100.24
SCNpilot_cont_300_bf_scaffold_61265_curated
Species: Microbacterium sp. MRS-1 (50%)
2 1390 bp 67.55 1.00 84.17
SCNpilot_cont_300_bf_scaffold_23663_curated
Species: Microbacterium sp. CH12i (50%)
2 1924 bp 70.79 1.00 100.10
SCNpilot_cont_300_bf_scaffold_44385_curated
Species: Microbacterium sp. C448 (50%)
2 1822 bp 67.34 1.00 56.48
SCNpilot_cont_300_bf_scaffold_53270_curated
Species: Microbacterium mangrovi (50%)
2 1131 bp 72.15 1.00 90.72
SCNpilot_cont_300_bf_scaffold_44427_curated
Species: Microbacterium sp. SUBG005 (50%)
2 1287 bp 68.22 1.00 96.27
SCNpilot_cont_300_bf_scaffold_70918_curated
Species: Microbacterium sp. TS-1 (50%)
2 1277 bp 71.03 1.00 100.08
SCNpilot_cont_300_bf_scaffold_18327_curated
Species: Microbacterium laevaniformans (50%)
2 2264 bp 70.89 1.00 80.17
SCNpilot_cont_300_bf_scaffold_41069_curated
Species: Microbacterium mangrovi (50%)
2 1374 bp 72.42 1.00 95.63
SCNpilot_cont_300_bf_scaffold_45831_curated
Species: Microbacterium sp. C448 (50%)
2 1241 bp 69.86 1.00 100.08
SCNpilot_cont_300_bf_scaffold_56246_curated
Species: Microbacterium mangrovi (50%)
2 1038 bp 72.35 1.00 88.73
SCNpilot_cont_300_bf_scaffold_24200_curated
Species: Microbacterium sp. SUBG005 (50%)
2 1949 bp 75.12 1.00 98.51
SCNpilot_cont_300_bf_scaffold_21905_curated
Species: Microbacterium mangrovi (50%)
2 3398 bp 68.81 1.00 95.70
SCNpilot_cont_300_bf_scaffold_55245_curated
Species: Microbacterium sp. CH12i (50%)
2 3011 bp 70.54 1.00 95.15
SCNpilot_cont_300_bf_scaffold_26962_curated
Species: Microbacterium mangrovi (50%)
2 1808 bp 73.01 1.00 91.59
SCNpilot_cont_300_bf_scaffold_58295_curated
Species: Microbacterium sp. MRS-1 (50%)
2 1748 bp 68.19 1.00 100.23
SCNpilot_cont_300_bf_scaffold_48171_curated
Species: Microbacterium sp. TS-1 (50%)
2 2221 bp 72.62 1.00 98.47
SCNpilot_cont_300_bf_scaffold_55391_curated
Species: Microbacterium sp. C448 (50%)
2 1070 bp 70.65 1.00 88.32
SCNpilot_cont_300_bf_scaffold_26081_curated
Species: Microbacterium testaceum (50%)
2 1847 bp 75.74 1.00 100.38
SCNpilot_cont_300_bf_scaffold_37669_curated
Species: Microbacterium sp. C448 (50%)
2 2049 bp 70.62 1.00 99.12
SCNpilot_cont_300_bf_scaffold_42534_curated
Species: Microbacterium hominis (50%)
2 1327 bp 73.55 1.00 96.53
SCNpilot_cont_300_bf_scaffold_53178_curated
Species: Microbacterium azadirachtae (100%)
2 1608 bp 68.22 1.00 99.25
SCNpilot_cont_300_bf_scaffold_39547_curated
Species: Microbacterium hominis (50%)
2 1398 bp 70.82 1.00 100.22
SCNpilot_cont_300_bf_scaffold_46678_curated
Species: Microbacterium sp. oral taxon 186 (50%)
2 1240 bp 66.45 1.00 94.60
SCNpilot_cont_300_bf_scaffold_21740_curated
Species: Microbacterium testaceum (50%)
2 2065 bp 68.81 1.00 95.59
SCNpilot_cont_300_bf_scaffold_59266_curated
Species: Microbacterium sp. C448 (50%)
2 988 bp 73.48 1.00 99.29
SCNpilot_cont_300_bf_scaffold_22589_curated
Species: Microbacterium mangrovi (50%)
2 2023 bp 70.00 1.00 100.10
SCNpilot_cont_300_bf_scaffold_55581_curated
Species: Microbacterium ginsengisoli (50%)
2 1054 bp 73.43 1.00 90.80
SCNpilot_cont_300_bf_scaffold_22463_curated
Species: Microbacterium mangrovi (50%)
2 2037 bp 72.36 1.00 99.56
SCNpilot_cont_300_bf_scaffold_48519_curated
Species: Microbacterium ginsengisoli (50%)
2 1193 bp 70.16 1.00 98.07
SCNpilot_cont_300_bf_scaffold_58333_curated
Species: Microbacterium azadirachtae (100%)
2 944 bp 67.69 1.00 98.52
SCNpilot_cont_300_bf_scaffold_55890_curated
Species: Microbacterium sp. C448 (50%)
2 1065 bp 75.68 1.00 70.42
SCNpilot_cont_300_bf_scaffold_33637_curated
Species: Microbacterium sp. C448 (50%)
2 1527 bp 69.22 1.00 56.97
Displaying items 451-500 of 598 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.