ggKbase home page

SCNpilot_cont_300_bf_scaffold_1433_curated_30

Organism: scnpilot_dereplicated_Nitrobacter_1

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: comp(33561..33767)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=10 Tax=Bradyrhizobiaceae RepID=B6JJC2_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 5.40e-31
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 1.70e-31
Cold-shock protein, DNA-binding {ECO:0000313|EMBL:EAQ37268.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 7.60e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGGAACCGTGAAGTGGTTTAACGCGACCAAAGGCTATGGCTTCATTCAACCCGACGATGGCGGAAACGACGTGTTCGTTCACATCAGCGCGGTTGAGCGGGCCGGACTCGGAACGCTGCGCGAGGGGCAGAAGATCAGCTACGAGATCGTTGCTGATCGCCGCTCCGGAAAATCGTCGGCCGACAATCTGCGAGCGGCCGGCTAG
PROTEIN sequence
Length: 69
MGTVKWFNATKGYGFIQPDDGGNDVFVHISAVERAGLGTLREGQKISYEIVADRRSGKSSADNLRAAG*