ggKbase home page

SCNpilot_cont_300_bf_scaffold_55632_curated_2

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(275..1051)

Top 3 Functional Annotations

Value Algorithm Source
mRNA-binding protein (EC:1.3.1.45) similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 257.0
  • Bit_score: 383
  • Evalue 7.40e-104
Putative mRNA-binding protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PT42_RHIE6 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 257.0
  • Bit_score: 383
  • Evalue 2.40e-103
NAD-dependent nucleoside-diphosphate-sugar epimerase protein {ECO:0000313|EMBL:AIC27957.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 258.0
  • Bit_score: 383
  • Evalue 1.90e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
CAGTTCATGCTGTTCACGCCCGACCAGATGGACGAGGACATCCGCGTCTTCACCGGCAAGACGGGCCAGTACATCTTCATTTCCTCGGCTTCGGTCTACGAGAAGCCGGCCCGCCACTATGTCATCACCGAGAAGACGCCGGCGGTGAACCCCTATTGGCCCTATAGCCAGGCCAAGATCGCCGCGGAGGAGAAGCTGCGCGCGACGAGCGGCCTTCCCTGGACGATCGTCCGGCCGAGCCACACGGTGCGCAACGGCATTCCGAGCATGATGAACGACGGCGATCTCTCCGCGCGGCGCATGCTGGCCGGCAAGCCGGTCATCGTCTGCGGCGACGGCACGACGCCCTGGACGCTGACACGCTCCGTCGATCTCGCGAAGCCGTTCATCGGCCTTTTCGGCAAGGAGAAGGCGATCGGCGAGGACTTCCACATCACCGCCGATCGCGGCCATGGCTGGGACGCGATCTACCGCACCATCGCCAAGGGCCTCGGCGTCGAGGCGAAGATCGTGCATGTGCCGACCGACACGCTCGTGCGTTACCACGCCGAATGGGAAGGCCCGCTGATGGGCGACAAGACCTGGGCGGCGCTGTTCGACAATTCGAAGGTCAAGAGCGTCGCCGGCGACTTCACCTGCGCCGAGGACCTCGAGACGATCCTCGCCGAGCCCATCGCCCATGTGAAGCGCCGCCTGGCCGGCCCGGCGCCGGATGCGAGCGCCATGGACGCATTGTTCGATCGCATCGCCGCCGAGCAGTCGGCGCTCGGCAGCTGA
PROTEIN sequence
Length: 259
QFMLFTPDQMDEDIRVFTGKTGQYIFISSASVYEKPARHYVITEKTPAVNPYWPYSQAKIAAEEKLRATSGLPWTIVRPSHTVRNGIPSMMNDGDLSARRMLAGKPVIVCGDGTTPWTLTRSVDLAKPFIGLFGKEKAIGEDFHITADRGHGWDAIYRTIAKGLGVEAKIVHVPTDTLVRYHAEWEGPLMGDKTWAALFDNSKVKSVAGDFTCAEDLETILAEPIAHVKRRLAGPAPDASAMDALFDRIAAEQSALGS*