ggKbase home page

SCNpilot_cont_300_bf_scaffold_1096_curated_13

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 12846..13178

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=IHFA_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 110.0
  • Bit_score: 203
  • Evalue 1.40e-49
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 110.0
  • Bit_score: 203
  • Evalue 4.50e-50
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 110.0
  • Bit_score: 203
  • Evalue 2.00e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGACCGAAACCGGAAAAACAGTCACGCGCGTTGATCTCTGCGAAGCCGTCTACAAAAAGGTGGGACTGTCGCGGACCGAATCGTCCGCATTCGTAGAGCTTGTTCTCAAGGAAATCACCGATTGCCTGGAGAAGGGCGAAACGGTGAAATTGTCGTCGTTTGGCTCGTTCATGGTACGCAAGAAGGGCCAACGTATCGGCCGCAACCCGAAGACCGGCACCGAGGTGCCGATCTCTCCGCGTCGCGTGATGGTCTTCAAACCGTCGGCGATTCTGAAGCAGCGGATCAACGGCAGCAATACCGGCAACGGCGTCCATACCAAGGCCGAGTAA
PROTEIN sequence
Length: 111
MTETGKTVTRVDLCEAVYKKVGLSRTESSAFVELVLKEITDCLEKGETVKLSSFGSFMVRKKGQRIGRNPKTGTEVPISPRRVMVFKPSAILKQRINGSNTGNGVHTKAE*