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SCNpilot_cont_300_bf_scaffold_139_curated_27

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 13213..14229

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 337.0
  • Bit_score: 607
  • Evalue 2.40e-171
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:CCJ06706.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:CCJ06706.1};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 337.0
  • Bit_score: 607
  • Evalue 1.10e-170
DNA-directed RNA polymerase subunit alpha n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QG31_METSZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 337.0
  • Bit_score: 607
  • Evalue 7.70e-171

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Taxonomy

Methylocystis sp. SC2 → Methylocystis → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
GTGATTCAGAAGAACTGGCAAGAACTCATCAAGCCGACCAAGCTCGACGTGACGCTTGGCGACGATCCGAAGCGTTTCGCAACGGTCGTGGCCGAGCCGCTGGAGCGTGGTTTCGGTTTGACGCTCGGCAACGCCCTGCGTCGCATTCTGTTGTCGTCGCTCCAGGGCGCTGCGATCAGCTCCGTCCACATCGACGGCGTGCTGCACGAGTTCTCCTCGATCCCCGGCGTGCGCGAGGACGTGACCGACATCGTCCTCAACATCAAGGACATCGCCGTCAAGATGCAGGCCGATGGTCCCAAGCGCATGATCCTGAAGAAGCAGGGTCCGGGCGCTGTGACCGCTGGCGACATCACGCTGACCGGCGACGTGCAGGTGCTCAATCCTGAGCTGGTGATCTGCAACCTCGACGAGGGTGCGGAAATCCGCATGGAATTCACCATCACCGGCGGCAAGGGCTATGTGCCGGCCGATCGCAACCGCGCTGAAGATTCGCCGATCGGCCTCATCCCGGTCGACAGCCTGTTCTCGCCGGTGCGCAAGGTCAGCTATCGCGTCGAGAACACCCGCGAAGGTCAGATCCTCGACTACGACAAGCTGACGATGACGATCGAGACCAACGGCGCCATCAACCCGGAAGATGCCCTGGCTTATGCCGCGCGCATCCTGCAGGACCAGCTCAACGTCTTCGTGAACTTCGACGAACCGAAGCGCGAAGAAGCGGCTCCGTCGATTCCGGAACTGGCGTTCAACCCGGCGCTGCTCAAGAAGGTCGACGAGCTCGAGCTTTCGGTGCGTTCGGCCAACTGTCTCAAGAACGACAACATCGTCTACATCGGCGACCTCATCCAGAAGTCGGAAGGCGAAATGCTGCGGACGCCGAACTTCGGCCGCAAGTCGCTCAACGAGATCAAGGAAGTGCTGGCGCAGATGGGCCTGCATCTCGGCATGGAAGTGCCGGGCTGGCCGCCGGAAAACATCGAAGAGCTGGCGAAGCGCTTCGAGGAACATTACTGA
PROTEIN sequence
Length: 339
VIQKNWQELIKPTKLDVTLGDDPKRFATVVAEPLERGFGLTLGNALRRILLSSLQGAAISSVHIDGVLHEFSSIPGVREDVTDIVLNIKDIAVKMQADGPKRMILKKQGPGAVTAGDITLTGDVQVLNPELVICNLDEGAEIRMEFTITGGKGYVPADRNRAEDSPIGLIPVDSLFSPVRKVSYRVENTREGQILDYDKLTMTIETNGAINPEDALAYAARILQDQLNVFVNFDEPKREEAAPSIPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEGEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIEELAKRFEEHY*