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SCNpilot_cont_300_bf_scaffold_87_curated_1719

Organism: scnpilot_dereplicated_Rhizobiales_2

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(1878939..1879226)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1U6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 95.0
  • Bit_score: 166
  • Evalue 9.80e-39
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 95.0
  • Bit_score: 166
  • Evalue 1.40e-38
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 94.0
  • Bit_score: 164
  • Evalue 1.50e-38

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGATCAAGTCCGAACTGGTCCAACGAATTGCCGATAAGAATCCGCATCTCTATCACCGGGACGTGGAGAATATCGTCAATGCGATCCTCGGCGAGATCACCAATGCGCTGTCGCGCGGTGATCGTGTCGAGCTGCGTGGCTTCGGAGCCTTCTCGGTGAAGCGTCGCGACGCCCGCGTCGGCCGCAATCCGCGCACCGGCGAACACGTGTCCGTCGAACAGAAGTCGGTGCCCTTCTTCAAGACGGGCAAGGAAATGCGCGAGCGTCTCAACACCGACGGACACTAG
PROTEIN sequence
Length: 96
MIKSELVQRIADKNPHLYHRDVENIVNAILGEITNALSRGDRVELRGFGAFSVKRRDARVGRNPRTGEHVSVEQKSVPFFKTGKEMRERLNTDGH*