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SCNpilot_expt_1000_bf_scaffold_4460_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3..1619

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 538.0
  • Bit_score: 993
  • Evalue 1.50e-286
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 538.0
  • Bit_score: 901
  • Evalue 9.90e-260
ATP-dependent DNA helicase n=1 Tax=Sinorhizobium medicae RepID=UPI00037BDEF4 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 538.0
  • Bit_score: 902
  • Evalue 1.80e-259

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
AGCCGGTTCCCCACAAAGAGCACCTGCATCGCCATCTATTCCCGCGTCGTAAATTCCGAGGCTTCGATCAAGGAGATCCTGAAGTCCTCGTATCCGTGGGTGCTCGAATGGGAGGAGGAGTTGAAGCAGCTCTTCGCCGCCTACGTTGAAGCCAAGCAGGCGCAGAACGTTCTGGATTACGACGATTTGTTGCTCTACTGGGCGCAGATGGTTTCCGAGCCGGAGCTGGCCGAGGACGTCGGCAACCGCTTCGACCACATCCTCGTCGATGAATACCAGGACACCAATCGCCTGCAGGCATCTATCCTGATGTCTCTCGCGCCCGGCGGCCGCGGTCTGACGGTCGTGGGCGACGATGCCCAATCGATCTATTCTTTTCGGGCAGCGACCATCCGCAACATCCTGGATTTTCCGCAGGAGTTCGCACCGAAGCCCGCAGACGTCATCACACTCGACCGGAACTATCGTTCGACCCAGCCGATCCTGGCCGCGGCCAATGCCGTCATCGAACTGGCACGCGAGCGCTATACGAAAAACCTCTGGACGGAGCGCGCCTCCGAGCAACGGCCGATGCTGGTCACCGTCAAGGACGAGGTCGACCAAGCCGCCTACATCGTCGATCAGGTGCTGGCCAATCGCGAGATCGGCATGACGCTGAAACAGCAGGCCGTGCTGTTCCGAACCTCGAGCCACAGCAGCGCGCTGGAGATCGAGCTCACGCGGAAAAACATTCCTTTCGTCAAATTCGGCGGTCTCAAGTTCCTCGACGCCGCGCATGTCAAGGACATGCTGGCGGTCATGCGGTTCGCTCAGAATCCGCGCGACCGGGTTGCCGGCTTCCGTGTGCTGAAGCTATTGCCCGGTATCGGACCGCAGACGGCCGGCAAGATCCTAGACACGATTGCCGCCGACCCCGAGCCCTTGCAGTCGCTGGCCGAAATCCCGCCGCCGGCCAAGACCGGTGACGACTGGCCAGCGTTCATCATGCTGGTCACGGCGCTGCGAAAGGCCGAAGCGGGCTGGCCGGCGGAGATCGGTACGGTGCGGATGTGGTACGAGCCGCATCTCGAACGCATTCATGAGGATGCCGACACCCGCAAGGATGACCTGCTCCAGCTGGAACAGATCGCCGGCGGCTATGCCAGCCGCGAACGTTTTCTCACGGAATTGACGTTGGACCCGCCGGACGCCACCAGCGACCAGGCCGGCGTACCGCTGCTCGATGAGGACTATCTGATCTTGAGCACGATCCATTCGGCCAAGGGGCAGGAGTGGCGCGCGGGGTTCATGCTCAATGTCGTCGACGGCTGCATCCCGTCCGATCTTGGCACCGGCTCTACCCCTGAACTCGAGGAAGAACGGCGCCTGCTTTACGTCGGCATGACGCGGGCGCGCGACAACCTCACGCTGATCACGCCGCAGCGGTTTTTTACGAGCGGGCAAAACGCCAGGGGCGACCGACACGTCACCGCTGCGCGAACACGCTTCATCCCAGCCACCCTCCTCCAGTTCTTCGAGGTGGAGGGCTGGCCGAAGGTGGGTGCTTCCGCCAGCGAGCAGAGCACGCGCCAGGTCCGCGTCGATATCGGTGCGCGGATGCGATCGATGTGGAAATGA
PROTEIN sequence
Length: 539
SRFPTKSTCIAIYSRVVNSEASIKEILKSSYPWVLEWEEELKQLFAAYVEAKQAQNVLDYDDLLLYWAQMVSEPELAEDVGNRFDHILVDEYQDTNRLQASILMSLAPGGRGLTVVGDDAQSIYSFRAATIRNILDFPQEFAPKPADVITLDRNYRSTQPILAAANAVIELARERYTKNLWTERASEQRPMLVTVKDEVDQAAYIVDQVLANREIGMTLKQQAVLFRTSSHSSALEIELTRKNIPFVKFGGLKFLDAAHVKDMLAVMRFAQNPRDRVAGFRVLKLLPGIGPQTAGKILDTIAADPEPLQSLAEIPPPAKTGDDWPAFIMLVTALRKAEAGWPAEIGTVRMWYEPHLERIHEDADTRKDDLLQLEQIAGGYASRERFLTELTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRAGFMLNVVDGCIPSDLGTGSTPELEEERRLLYVGMTRARDNLTLITPQRFFTSGQNARGDRHVTAARTRFIPATLLQFFEVEGWPKVGASASEQSTRQVRVDIGARMRSMWK*