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SCNpilot_expt_1000_bf_scaffold_6396_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3..794)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, VC_A0110 family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIH5_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 272.0
  • Bit_score: 250
  • Evalue 1.90e-63
Uncharacterized protein {ECO:0000313|EMBL:KJS08456.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 263.0
  • Bit_score: 312
  • Evalue 7.30e-82
type VI secretion protein; K11896 type VI secretion system protein ImpG similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 272.0
  • Bit_score: 250
  • Evalue 5.80e-64

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Taxonomy

Hoeflea sp. BRH_c9 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGAACCGCGAATTCCTGGAATTCTACGACCGCGAACTGAAAATCCTCTATGAGCGCTCGCAGGAATTCGCCGAGGAATTTCCGGGCGTCGGCAAGCGGCTGGGAGCGCTGACCGAAGAGAAGATCGACCCCGCCATCGGCGGCTTGCTGGAAGGCGCCGCCTTCATGGCCGCGCGCGTGCAGCTGAAGCTGAAAAGCGAATTCGACACCTTCACCGTCGAGCTGATCGAGCAGCTGCTGCCCGGCTTCCTCGCGCCGACGCCCTCGTTCGCCATTGCCCAGGCGCGGCCGGATTATGCCAATCCGGCGCTGAAGAACGGCATGCGTCTCAAGGCCGGGCAATATATCGAGACCGCCTTCATGGAGCGCGAGCGCCGCGTCGCCTGCCGTTATCGGCTGGTGTCGGATATCCATCTCTGGCCCTATGCGGTTGCCTCGGCCAGTTACCATCCCTCCGCCGCGCCGCTGCAGGCGCAGGGCTTCGATTGCGGCCCGACGGTCGCCTCGGGGCTGCAGATCGATCTCGAACTGCGCGACAATGCCGAGGGCCAGCCGCGCGCGGCCGATCTCAAGGTTTCCGCCTCGCCGGCCGACGAATTCACCTTCCACCTCACCGGGCCGATGAGTGATGCGGTGTCGCTGTGCGAGCAGGTGTTTTCGCGGCTGGAAAAGGTGGCGATCCGCTATCTCAACGCGGCGGGCGACCCGCGTTTCATCCTTGTCGATCCCGCAAGCATCGAGCCGGTTGGCTTCCGGCGCGGGGAATCGCTGTTTTCCCATGACAACCGCTTT
PROTEIN sequence
Length: 264
MNREFLEFYDRELKILYERSQEFAEEFPGVGKRLGALTEEKIDPAIGGLLEGAAFMAARVQLKLKSEFDTFTVELIEQLLPGFLAPTPSFAIAQARPDYANPALKNGMRLKAGQYIETAFMERERRVACRYRLVSDIHLWPYAVASASYHPSAAPLQAQGFDCGPTVASGLQIDLELRDNAEGQPRAADLKVSASPADEFTFHLTGPMSDAVSLCEQVFSRLEKVAIRYLNAAGDPRFILVDPASIEPVGFRRGESLFSHDNRF