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SCNpilot_expt_1000_bf_scaffold_24246_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 6360..6662

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 204
  • Evalue 1.80e-50
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 204
  • Evalue 8.20e-50
DNA-directed RNA polymerase subunit beta (Fragment) n=1 Tax=Rhizobium sp. Pop5 RepID=K0W8T6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 204
  • Evalue 5.80e-50

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGAAAATCAGTATCGCCTCGGCCTGCTGCGCATGGAGCGCGCCATCAAGGAGCGCATGTCGTCGATCGAGATCGACACGGTCATGCCGCAGGATCTGATCAACGCCAAGCCGGCCGCGGCTGCCGTGCGCGAATTCTTCGGTTCGTCGCAGCTGTCGCAGTTCATGGACCAGGTGAACCCGCTTTCGGAAATCACCCACAAGCGCCGTCTCTCGGCTCTTGGTCCGGGCGGTCTGACCCGTGAGCGCGCCGGCTTCGAAGTCCGCGACGTTCACCCGACCCATTACGGCCGTATTTGCCCG
PROTEIN sequence
Length: 101
MENQYRLGLLRMERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICP