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SCNpilot_expt_1000_bf_scaffold_1396_curated_57

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(66267..67628)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DAB388 similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 442.0
  • Bit_score: 572
  • Evalue 4.80e-160
Type VI secretion protein {ECO:0000313|EMBL:KJS08461.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 441.0
  • Bit_score: 690
  • Evalue 2.20e-195
type VI secretion protein; K11893 type VI secretion system protein ImpJ similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 443.0
  • Bit_score: 558
  • Evalue 2.30e-156

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Taxonomy

Hoeflea sp. BRH_c9 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGGCAGGTGCGACCGGTGTCGGGGGAGTATGGGCGATGTCATGGTACAGCAAGGTCGTGTGGTCGGAAGGACTTTTCCTCCATCAGCACCATTTGCAGCAGCATGACCGCTATGTCGAAAAACTCCTCGAAAACCGCGTCGGCTATATCACCCCCTATCCCTGGGGCTTCGTCGAGCTGGAGATCGACCGCGATCTCGCCCAGCAGAACAAGTTCGGCCTGCGCCGCGCCTCGGGCGTCTTCCAGGATGGCGTGCCCTTCGACATGCCGGGCAACAGCCCGCTGCCGGCCCCGGTCGATATTCCCGAGGGTTCGGAGCGGCGCATCGTCTGGATGACCATGCCGGTCGCGACGCCGAACGGTCGCGAGGTCGCGGCCGCCAATGGCGGCAACGGCAGCCGCTACACGCTCGATCTCGAAACCTTCGTCGATTCCGCCTCCGGCATGCATGTCGCCCAGGATATCGAGGTGGCGCATCCGCGCATCGAATTCTCGGTGCGCGAGACGCCGCGCCCCGGCTATCACAACCTCGCCATCGCCCGCATCGTCGAGGTGCGCGACAAGACCATCGTGCTCGATGAGCGCGTCGCCCCGCCGGTGCTCAGCTGCCATGCGCATCCGGTCACCACCGGCTGGCTGGACCGGGTGATCGGCTGGGTGGAGACAAGGCTGGAGGCCCTGTCGCGCTATGCCACCGATCCCAGCTCCGGCGGGGGCTTGCAGGCCTACGACTATTTTATGCTGCAATTGCTCAACGGCCAGGTGAACGTGCTGCGCCACAGCCGCGCCTCGAAATACCTGCATCCCGAGCGGCTTTATGTCGACCTCATCCGCTTTGCCGGCGAGCTTTCCACCTTCTCGGGAAACCGCATGGCGCCGGATTTTCCGCGCTACGACCATGACCGGCTGCATGAGGTGTTCGAGCCGATCCTCGAAATCATCCAGCGCCAGCTCAGCCTCGATATCGGCCGGGCGATCCGGCTGGATCTCACACAGGTGCGGCCCAACGCCTTCCTCGCCAATGTCATCAACCGCAACCTGTTCCGCACGGCGCGTTTCGTGGTCGAGGTCTCGGCGGCGATGCCGCTGTCGCAGATCCAGCAGAGCTTTCCCGATCTGTGCAAGGTCGGGCCGAACACCAAGATGCGCGAGATCGTCCAGACGCATCTGCCGGGCATCGACATCGTTCACATGCCGACGCCGCCGCGCCAGATCCGCAGCATGACCGACCACGTCTATTTCTATCTCGACAAGGCCTCGCCGCTCTGGCCCGAATTCAGCACGGCGAGCGGCATCGCCATGCATTTCGCCGGCAACTGGCCGGAGCTGCAACTGGATCTCTGGGCGATAATGGACGACTGA
PROTEIN sequence
Length: 454
MAGATGVGGVWAMSWYSKVVWSEGLFLHQHHLQQHDRYVEKLLENRVGYITPYPWGFVELEIDRDLAQQNKFGLRRASGVFQDGVPFDMPGNSPLPAPVDIPEGSERRIVWMTMPVATPNGREVAAANGGNGSRYTLDLETFVDSASGMHVAQDIEVAHPRIEFSVRETPRPGYHNLAIARIVEVRDKTIVLDERVAPPVLSCHAHPVTTGWLDRVIGWVETRLEALSRYATDPSSGGGLQAYDYFMLQLLNGQVNVLRHSRASKYLHPERLYVDLIRFAGELSTFSGNRMAPDFPRYDHDRLHEVFEPILEIIQRQLSLDIGRAIRLDLTQVRPNAFLANVINRNLFRTARFVVEVSAAMPLSQIQQSFPDLCKVGPNTKMREIVQTHLPGIDIVHMPTPPRQIRSMTDHVYFYLDKASPLWPEFSTASGIAMHFAGNWPELQLDLWAIMDD*