ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2456_curated_36

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 33445..34257

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHB7_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 266.0
  • Bit_score: 380
  • Evalue 1.60e-102
transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 266.0
  • Bit_score: 380
  • Evalue 5.00e-103
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGB70617.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 266.0
  • Bit_score: 380
  • Evalue 2.20e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGGAGGCGGCCCGCTTCTGGCGCGCGGGGCGGTTTCGCGGCATGGAATGCCTGAGCGCCACCTTCCACACCCATGAATATGCGCCGCACACCCACGATACCTTCAGCATCGGCGCGATCGAGAAAGGCAGCCAGATCGCCTCGATTCGCGGCGAGCGCGAGGAAACCGGCCCCGGCGGACTCTATCTGATCAATCCCGACGACATTCATGACGGTGCGCCCGGCGAAAGCGGCTATCGCTACCGGATGGTCTATCCGGCTGCGGAGCTGTTCGCCGATATTCTCGAGGATGTTTCCGGCCGCGAACTGAAGGGCACACCCTCCTTTTCCCGCCGGCTGGTCAGCGATCCCGAACTTGCGGCCGCTTTCCATCATGCCCACCGGACGATGGAGCAGGAGACCGGACGGCTGGAGACCGACGAATCGATGTTCCGGCTGCTGTCGGCGATCTTCGTGCGCCATGGTGCGGTGCGGGTCAGCCCGCTCGCCAGCCGCGAAAGCAGTGCGGCGCGGCGGGTGCGCGATTACATCGAGGCGCATTACGAGAACGATCCGGGACTGGAGGAACTGGCGGCCGTCGCGGGTTTGAGCCGCGCCCATATGATCCGCTCCTTCCGCCGCGAATTTTTCACGACGCCGCACGCCTTCCTGACCGATGTGCGCGTGCGCGCGGCGCGAAAACGGCTGCGCGACGGTGAGACGCCCGCCGAAGTGGCGCTCGCCTGCGGCTTTGCCGACCAGGCGCACCTGACCCGCCACTTCAAGGCGCGCACCGGCGTGACGCCCGGCCAGTTTCGCGGGGCCGGCCGATAA
PROTEIN sequence
Length: 271
MEAARFWRAGRFRGMECLSATFHTHEYAPHTHDTFSIGAIEKGSQIASIRGEREETGPGGLYLINPDDIHDGAPGESGYRYRMVYPAAELFADILEDVSGRELKGTPSFSRRLVSDPELAAAFHHAHRTMEQETGRLETDESMFRLLSAIFVRHGAVRVSPLASRESSAARRVRDYIEAHYENDPGLEELAAVAGLSRAHMIRSFRREFFTTPHAFLTDVRVRAARKRLRDGETPAEVALACGFADQAHLTRHFKARTGVTPGQFRGAGR*