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SCNpilot_expt_1000_bf_scaffold_2993_curated_32

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 31427..31744

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator RutR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJ50_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 102.0
  • Bit_score: 180
  • Evalue 7.30e-43
HTH-type transcriptional regulator RutR {ECO:0000313|EMBL:EYR81950.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 102.0
  • Bit_score: 180
  • Evalue 1.00e-42
tetracycline transcriptional regulator YcdC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 103.0
  • Bit_score: 175
  • Evalue 9.60e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGGCCGAGTCCCGGCTTTTCGCCAGCGAGATCATCCAGGGCGCCCGCTTCCTGACGAAGAAGGACCGCGAGCATATCCGCCAGGTGACGGATAGACATGTCGCCGTCATCGAAGGCTGGATCGCCGCCGGCAAAATGCTGCCGGTCGATCCCCGCCACCTGTTCATCATGCTCTGGGCCTCGACACAGTTCTATTCCGACTTCGAACCCGTCGCCATCGACGCCCTCAAGACGTCACGCCTAAAAGCCGGCGACTACGACAAGGCCGCCGCCACCATCGCCGAAACGATCCTGAGGGGTATCCTGCCCTGTTCTTGA
PROTEIN sequence
Length: 106
MAESRLFASEIIQGARFLTKKDREHIRQVTDRHVAVIEGWIAAGKMLPVDPRHLFIMLWASTQFYSDFEPVAIDALKTSRLKAGDYDKAAATIAETILRGILPCS*