ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2824_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(766..1002)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor GreA n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000371DDDD similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 78.0
  • Bit_score: 148
  • Evalue 3.00e-33
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 78.0
  • Bit_score: 146
  • Evalue 2.10e-32
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 78.0
  • Bit_score: 145
  • Evalue 6.10e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGTCCGGCTCGACCATCAAGTTCGGCGCCACCGTCAAGCTGGTCGACGAGGATACCGAGGAAAAGAAGACCTACCAGATCGTCGGCGATCAGGAAGCCGATGTGAAGGCCGGCCGCATCTCCATTTCCTCGCCGATCGCCCGCGCGCTGATCGGCAAGGAAGTCGGCGATTCCATCGAGGTCAATGCGCCCGGCGGCTCAAAGGCCTACGAAATCCTGGCGATTTCCTGGGGCTGA
PROTEIN sequence
Length: 79
MSGSTIKFGATVKLVDEDTEEKKTYQIVGDQEADVKAGRISISSPIARALIGKEVGDSIEVNAPGGSKAYEILAISWG*