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SCNpilot_expt_1000_bf_scaffold_1786_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 21214..21834

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UA63_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 183.0
  • Bit_score: 135
  • Evalue 5.20e-29
Uncharacterized protein {ECO:0000313|EMBL:KKB85182.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 188.0
  • Bit_score: 232
  • Evalue 7.50e-58
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 183.0
  • Bit_score: 135
  • Evalue 1.60e-29

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGGTGAGAAGAGCCCGGGAGAGCGCATCACCGAGGCCGAACTGGCCACCATGCTGAATGTCAGCCGAATGCCTGCCCGCGAGGCGATCCAGAAACTGCACCTGCGCGGCATTCTCGTCGAAGGCGATCAGCGCGGGATGCGGGTCGCCGATTACAGCGCGGAGCGTGTCGCGGAATTGTTCGAGCTTCGACATGCGATCGAGCGCGTCGTCCTGCGCCGGATCATGAGCGAGGGGTTCGACCGCGGCCCTCTTCTCGAGGAACTGGAAGAGATCATCGCGCGTATGCGCAGTCTGGTCGGATCGGGAGACCCGCTGGCGCTCGGTTCGATCGACATGGAGCTTCATCGCGCCATCGTGCGCCATTCCGGCAATCAACTCGCAGCCAAGATCTGGGAAGGTCTCGCCCAGCACACGATCATCGTTTTCCTGCGCGACTGGGCCAGCGTCGCGGACCGCACCGGCGAGGTCGAGCTGCATGAGCGGCTGGTGGATTTCGTGCGGAACGGCTCGATCGACGACATCGACCAGAAGCTTTACGAGCATTATACGCCCGCCGATGCCCGGCCGAAACGGGACAAAGCGGGGCCCTTGCCGGACGTCGCGCCCAACGGGACGTGA
PROTEIN sequence
Length: 207
MGEKSPGERITEAELATMLNVSRMPAREAIQKLHLRGILVEGDQRGMRVADYSAERVAELFELRHAIERVVLRRIMSEGFDRGPLLEELEEIIARMRSLVGSGDPLALGSIDMELHRAIVRHSGNQLAAKIWEGLAQHTIIVFLRDWASVADRTGEVELHERLVDFVRNGSIDDIDQKLYEHYTPADARPKRDKAGPLPDVAPNGT*