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SCNpilot_expt_1000_bf_scaffold_685_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 23454..24494

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI0003782F29 similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 346.0
  • Bit_score: 660
  • Evalue 1.00e-186
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 346.0
  • Bit_score: 657
  • Evalue 2.10e-186
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABR60550.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 346.0
  • Bit_score: 657
  • Evalue 9.30e-186

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGAATATTTTCAAGGCGACTATCATTGCATCCACCGTCCTGATGGCAGGCGGTTTCGGTGCGCAGGCCCGCGATCTGACCGTGGTGTCGTGGGGCGGAAATTTCCAGGATGCCCAGCGCAAAATCTTCTTCGAACCCTTCGCAGCGCAGACCGGCAAGCCGGTTCTCGATGAAAGCTGGGATGGTGGTTACGGCGTTCTCCAGGCGAAGGTGAAGGCTGGCGTTCCGAACTGGGATGTCGTCGAAGTCGAAGCCGAAGAACTGGCGCTCGGTTGTGCCGACGGCATCTATGAAAAGATCGATTGGGACAAGCTCGGCGGCAAGGCCGCATACCTTCCCGCAGCCGTCAGCGATTGCGGCGTCGGCAACATCGTCTGGTCGACCGGCCTTTCCTACGATGGCGACAAGCTCAAGGACGGTCCGAAGACGTGGGCCGATTTCTGGGATACGAAGAAGTTCCCCGGAAAGCGCGGCCTTCGCAAGGGCCCGAAATACGCCCTCGAATTCGCCCTTATGGCCGACGGCGTTCCCGCTGATCAGGTCTACAAGGTCTTGAGCGGCGAAGGCGGTGTTGACAGGGCATTCAAGAAGCTCGACGCGCTGAAGGCCGACATCATCTGGTGGGATGCCGGTGCGCAGCCGCTCCAGCTTCTGTCGTCCGGCCAGGTCGTCATGACCTCCGCTTATAACGGTCGTATCAGCGGCATCAACCGGACCGAAGGCAAGAAGTTCGGCTTCGTCTTCCCGGGCAGCGTTTACGCCATAGACAGCTGGGTCATCCTGAAGGACAGCCCGAACAAGGACGCAGGCATGGATTTCATCGCCTATGCCAGCAAGGCTGAGAACCAGGCCAAGCTTCCCGAATTCATCGCATATGGCCTGCCGAACCTCGGCGCGACCAAGCTTGTGCCGGAACAGTTCCAGAAGGAACTTCCGACCACCGAGGAGAACATCAGCGGCGCCATTCCGCTCGATGTCGACTTCTGGACCGACAACTCGGAAGAGTTGACGCAGCGCTTCAACGCCTGGCTCGCTCAGTAA
PROTEIN sequence
Length: 347
MNIFKATIIASTVLMAGGFGAQARDLTVVSWGGNFQDAQRKIFFEPFAAQTGKPVLDESWDGGYGVLQAKVKAGVPNWDVVEVEAEELALGCADGIYEKIDWDKLGGKAAYLPAAVSDCGVGNIVWSTGLSYDGDKLKDGPKTWADFWDTKKFPGKRGLRKGPKYALEFALMADGVPADQVYKVLSGEGGVDRAFKKLDALKADIIWWDAGAQPLQLLSSGQVVMTSAYNGRISGINRTEGKKFGFVFPGSVYAIDSWVILKDSPNKDAGMDFIAYASKAENQAKLPEFIAYGLPNLGATKLVPEQFQKELPTTEENISGAIPLDVDFWTDNSEELTQRFNAWLAQ*