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SCNpilot_expt_1000_bf_scaffold_1280_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4082..4879)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium sp. CF122 RepID=J2ICY0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 265.0
  • Bit_score: 477
  • Evalue 9.40e-132
Putative amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:CDM59628.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 265.0
  • Bit_score: 477
  • Evalue 1.30e-131
amino acid ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 265.0
  • Bit_score: 474
  • Evalue 2.50e-131
  • rbh

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGACGTCCAGACGCTCGTTTCTCGCCGCCCTGACCGCCCTCGTGCTCGCCCCCGTCGCGAGCTTTGCCGCCAGCCTGCCGGATCTCGGCGGCCGCACGGTCGTTGTCGTCACCGAAAACGCCTATCCGCCGCTGCAATTCGTCGATCCTCAGACCGGCGAAGCCAAGGGCTGGGAATACGACGCGATGAACGAGATCGCCAAGCGCCTGAATTTCAAGGTCGAATACCAGAACACCTCCTGGGATGCGATGATCCAGGCCGTCTCCGACAATCAATACAACATCGGCATGACCGGCATCACCATCAAGGACGAGCGCAAGGAGAAAGTCGATTTCTCCGATCCCTACATGCGTTCGGAGCAGTTCATGCTGGTGCGCGGCGACGAAAACCGCTTTACCGACGCAAAAACCTTCGGCGCCTTCAAGGACGGCCTGATCGGCGCCCAGCCGGGCACCTCGCCCTTCTACACCGCCGTCTATTCGATCCTCGACGGCAATGAGCAGAACCCGCGCATCAAGCTGATGGAAACGTTTGGCGCCACCGTGCAGGCCCTCAAGGCCGGCGACGTCGACGTCGTGCTCACCGACAGCGTCGCCGCCCAGGGCTACGTCGATTCTTCGAATGGCGGCCTGAAGGTCATCGGCGGCCCGCTCGGCACCGAGGATTTCGGCTTCATCTTCCCCAAGGGCTCCGATCTGGTCGCGCCAGTGAATGCCGCGATCGCCGCCCTCAAGGCCGACGGCACGATCGACGCACTCAACAAGAAGTGGTTCCTCGACTACAAGATGGGCCAATGA
PROTEIN sequence
Length: 266
MTSRRSFLAALTALVLAPVASFAASLPDLGGRTVVVVTENAYPPLQFVDPQTGEAKGWEYDAMNEIAKRLNFKVEYQNTSWDAMIQAVSDNQYNIGMTGITIKDERKEKVDFSDPYMRSEQFMLVRGDENRFTDAKTFGAFKDGLIGAQPGTSPFYTAVYSILDGNEQNPRIKLMETFGATVQALKAGDVDVVLTDSVAAQGYVDSSNGGLKVIGGPLGTEDFGFIFPKGSDLVAPVNAAIAALKADGTIDALNKKWFLDYKMGQ*