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SCNpilot_expt_1000_bf_scaffold_1689_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 14689..16182

Top 3 Functional Annotations

Value Algorithm Source
L-proline glycine betaine ABC transport system permease protein ProW n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z7N9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 498.0
  • Bit_score: 417
  • Evalue 1.70e-113
Putative Glycine betaine/proline ABC transporter, permease protein {ECO:0000313|EMBL:CDX36419.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 496.0
  • Bit_score: 461
  • Evalue 1.80e-126
binding-protein-dependent transport system inner membrane protein; K02001 glycine betaine/proline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 499.0
  • Bit_score: 383
  • Evalue 1.40e-103

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGAACGACCGTTCCGCACGCGATGAAGCCGTGGATCGCTTCGCCGGCGTCAGCAGCGCCTATTATCGTGAGGCGTTCCGCAAGATCGGCGCGCGCCGCGGGTATGTGCCCTCCTTCAACGTCGCCGCCGCCCTGCTCGGCCCTGTCTGGCTCGGGGGCCGCCGCCTCTGGTCGGCATTCTGGCCCTTCCTGATCGCCGATCTTCTCGCCGTCGTCCTCATCGCCTTCGCCCTTGCGGGCGGTGCGGGCAGCGAACTCGGCGCGCGCGCGGACAGGCTCGAGGCACTCGCCGCCACCCGCCATTCCGAGGCGAACGCGGCGAACGGGAGGGATGCGACGTCCGCCATCGCCAAATCATTGACGCGCTCGGCCGCCGCTCTTGAGCAGGCCGCCAGGGATGCACGCCGTGCTGCGGAGGATGCCCGTGACGGGGCCTTCCTGATCGTCGTGCTCGGCGGCGGCCTTGTCGCCGTCGCGCGCCTCGGGACAGGCGCCCTTGCAAACCATATGGCCGAACGGCGCTTCCGGGAATGGCGGCTTGCCGGCGATCCGGACAAGGCGGGTTTCAGTCTGCCGCATGCTGCAGGCGCGGCCTTCCTGCTTGCGGTCTTCATACCCGTCATCGCCTTTCATTTCGGCAATCGGGCCCTTTTCGACGCCTTCCCAAGTGAGCCGGCGTGGAATTCGGCCGCCGCGGCATGGCTCGACAATGCGATCACTGCGATGAGCGGTGCGGTTGCGCCGGCGGCGACTGCCCTGACCCGCGCAATCAACACCATGCTGGGCCTGATGGAGGCTGTGCTGACCCAAACGCCCTGGCCTGTGGTGATGGCCGTCATCCTGGCCATCGCTTGGCAGCTCGCCGGCTTTCGCATCTTCCTCCTCACCTTCTTCGCGATCAGCTATCTCGCTCTCCTTGGCTACTGGGAAAAGAGCATGCAGACCGTCGCCCTCCTTGGCACCGCGGCGCTGATCTCGATCACGATCGGCATCCCGCTCGGCGTGTTGTGCGGCTATCGCCGGCGCGTGGCGGCGGTCGTGCGCTCCCTGCTCGACTTCATGCAGACCATGCCGGCCTTCGTCTATCTGATCCCGGTCATCGCGCTCTTCGGCATCGGGAAGCCCTCGGGGATTATCGCGACCATCATCTTCGGCATACCGCCCGTGGTGCGGCTTACAGCGCTCGGCATCACGTCAGTGCCCGCTTCCGTGCGCGAGGCCGCGGTGGCCTTCGGCGCGTCCCGTCGGTTTATCCTCTTCAAGGTTGATCTTCCGACCGCCGCGCCCTCGATCATGGCAGGCATCAGCCAAACGATCCTCATGTGCCTGTCCATGGTTGTGATCGCCGCCCTGATCGGCGCCAAGGGTCTTGGCGAAGATGTGCTGCATGCACTGCAATACGCGGCGCAGGGCCAAGGTCTGCTAGCCGGTCTTGCCATCCTTTTGTGTGCGATCGTCCTCGACCGCGTCGTCCAGGGCCGACAGTCGCGTTGA
PROTEIN sequence
Length: 498
MNDRSARDEAVDRFAGVSSAYYREAFRKIGARRGYVPSFNVAAALLGPVWLGGRRLWSAFWPFLIADLLAVVLIAFALAGGAGSELGARADRLEALAATRHSEANAANGRDATSAIAKSLTRSAAALEQAARDARRAAEDARDGAFLIVVLGGGLVAVARLGTGALANHMAERRFREWRLAGDPDKAGFSLPHAAGAAFLLAVFIPVIAFHFGNRALFDAFPSEPAWNSAAAAWLDNAITAMSGAVAPAATALTRAINTMLGLMEAVLTQTPWPVVMAVILAIAWQLAGFRIFLLTFFAISYLALLGYWEKSMQTVALLGTAALISITIGIPLGVLCGYRRRVAAVVRSLLDFMQTMPAFVYLIPVIALFGIGKPSGIIATIIFGIPPVVRLTALGITSVPASVREAAVAFGASRRFILFKVDLPTAAPSIMAGISQTILMCLSMVVIAALIGAKGLGEDVLHALQYAAQGQGLLAGLAILLCAIVLDRVVQGRQSR*