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SCNpilot_cont_300_bf_scaffold_3716_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3716_curated_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..824
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037149CD
Phosphonate ABC transporter periplasmic phosphonate-binding protein {ECO:0000313|EMBL:CDX15420.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC-type phosphate/phosphonate transport system, periplasmic component
SCNpilot_cont_300_bf_scaffold_3716_curated_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(828..1280)
DNA (453bp) protein (151aa)
Transcriptional regulator, MarR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IGU0_XANP2
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABS67233.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_3716_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1538..3361
DNA (1824bp) protein (608aa)
GTP-binding protein TypA n=1 Tax=Kaistia granuli RepID=UPI0003611260
GTP-binding tyrosin phosphorylated protein {ECO:0000313|EMBL:KFC70906.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GTP-binding protein TypA; K06207 GTP-binding protein
SCNpilot_cont_300_bf_scaffold_3716_curated_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3484..3996
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F54A6
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EKF41835.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_3716_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4127..4657
DNA (531bp) protein (177aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
inorganic diphosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
inorganic pyrophosphatase n=1 Tax=Kaistia granuli RepID=UPI00037523B1
SCNpilot_cont_300_bf_scaffold_3716_curated_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4666..5130
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DE30C
Uncharacterized protein {ECO:0000313|EMBL:KKB79976.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_cont_300_bf_scaffold_3716_curated_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5135..5455)
DNA (321bp) protein (107aa)
UPF0235 protein SL003B_0257 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J149_POLGS
hypothetical protein; K09131 hypothetical protein
UPF0235 protein SL003B_0257 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3716_curated_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5452..5742)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003605F0E
hypothetical protein; K02221 YggT family protein
Hypothetical transmembrane protein {ECO:0000313|EMBL:ADZ68694.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3716_curated_9
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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6993..7847
DNA (855bp) protein (285aa)
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
SCNpilot_cont_300_bf_scaffold_3716_curated_10
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7856..8194)
DNA (339bp) protein (113aa)
Small multidrug resistance protein n=2 Tax=Burkholderia RepID=E8YS07_9BURK
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ADX57303.1}; Flags: Precursor;; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
SCNpilot_cont_300_bf_scaffold_3716_curated_11
unknown

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8441..9784
DNA (1344bp) protein (448aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3716_curated_12
unknown

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comp(9955..10890)
DNA (936bp) protein (312aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3716_curated_13
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11454..12428)
DNA (975bp) protein (325aa)
sugar ABC transporter permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B5BE8A
Uncharacterized protein {ECO:0000313|EMBL:KDP76592.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ribose transport system permease protein rbsC-like
SCNpilot_cont_300_bf_scaffold_3716_curated_14
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12428..13933)
DNA (1506bp) protein (502aa)
D-ribose transporter ATP binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B3EE62
Ribose ABC transporter {ECO:0000313|EMBL:ENN86822.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ribose import ATP-binding protein RbsA 1-like
SCNpilot_cont_300_bf_scaffold_3716_curated_15
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14141..14965
DNA (825bp) protein (275aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2KCT1_9RHIZ
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EUB97341.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
IclR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3716_curated_16
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15059..15460)
DNA (402bp) protein (134aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U9B0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KDP76590.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
periplasmic binding protein/LacI transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3716_curated_17
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16049..16819)
DNA (771bp) protein (257aa)
short-chain dehydrogenase/reductase SDR; K00034 glucose 1-dehydrogenase [EC:1.1.1.47]
Glucose 1-dehydrogenase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HPB6_GLUDA
Glucose 1-dehydrogenase {ECO:0000313|EMBL:CAP56568.1}; Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACI50630.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_300_bf_scaffold_3716_curated_18
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16788..17324)
DNA (537bp) protein (179aa)
Mannonate dehydratase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VUK2_9EURY
Mannonate dehydratase {ECO:0000313|EMBL:AHG02296.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
Mannonate dehydratase
Displaying 18 items

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