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SCNpilot_cont_300_bf_scaffold_217_curated_157

Organism: scnpilot_dereplicated_Spirosoma_1

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 144966..145484

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Spirosoma panaciterrae RepID=UPI0003623E66 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 172.0
  • Bit_score: 316
  • Evalue 1.80e-83
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AKD54700.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 172.0
  • Bit_score: 277
  • Evalue 1.30e-71
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 172.0
  • Bit_score: 271
  • Evalue 1.60e-70

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 519
ATGGATCTACAAGCCTTTAAACAACGCATCCTGCCCGTTCAGGGACGCCTTTTCCGATTGGCGCAGTTGTTTCTTCGCAATCGTGAAGAAGCCGAAGATGCCTTACAGGATGTGTTGCTACGATTGTGGACCAATCGACAACAATTAGAAACGTATACCAGTATCGAAGCTCTGGCTGTACAGATGACGAAGAATTTGTGTCTGGACAAGCTAAAAGCTCATTCCAGGCGCAACTATTCCGATGAGGCTACATTACTTGGCATTCAGACCGATGATGCTTCGCCCTATCGACAGGTCGAAGTAGCCGATAGTGCCGAGCTTATGCGAATCCTCATCGATGAATTACCTGAACAGCAGAGACTTATCCTTCACCTGCGTGACGTAGAAGAGTACTCGTTTGAAGAGATCGAACAGGTAACGGGCGTCAGTATTAATAATATACGTGTGATTTTGTCGAGAGCCCGCCAACGGCTTCGGCAGAATTATCTAAAAGTCAATGATTATGAAGCCGGACATTGA
PROTEIN sequence
Length: 173
MDLQAFKQRILPVQGRLFRLAQLFLRNREEAEDALQDVLLRLWTNRQQLETYTSIEALAVQMTKNLCLDKLKAHSRRNYSDEATLLGIQTDDASPYRQVEVADSAELMRILIDELPEQQRLILHLRDVEEYSFEEIEQVTGVSINNIRVILSRARQRLRQNYLKVNDYEAGH*