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SCNpilot_cont_300_bf_scaffold_380_curated_3

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1381..2721)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Variovorax sp. CF313 RepID=J2K3J9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 446.0
  • Bit_score: 834
  • Evalue 6.70e-239
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL67838.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 446.0
  • Bit_score: 834
  • Evalue 9.30e-239
general substrate transporter; K03288 MFS transporter, MHS family, citrate/tricarballylate:H+ symporter similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 447.0
  • Bit_score: 830
  • Evalue 2.30e-238

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGAATCCCGCGCCTTCCACCGCGCAAAAGGGCACTGCCGCCGCGCACGCTTCGCCCGCACCCTCCTCGAAATTCGCCACCGTCCTGCGTGTGACCGGCGGCAACTTCATGGAGATGTTCGACTTCTTCCTGTTCGGCTTCTACGCCACGCAGATCTCGAAGGCGTTCTTCCCGGCCGGCGACGAGTTCGCCTCGCTGATGCTGACCTTCATGACCTTCGGCGCCGGCTTCCTGATGCGGCCGCTGGGCGCGATCTTTCTCGGCGCATACGTCGACCGCGTGGGCCGCCGCAAGGGCCTGATCGTCACGCTCGCGCTGATGGCCACCGGCACGCTGCTCATTGCCTGCGTGCCTTCTTACGCCACCATCGGCCTGGTGGCGCCGCTGCTGGTGCTCATCGGCCGGCTGCTGCAAGGCTTCTCGGCCGGCGTGGAACTGGGCGGCGTGTCGGTGTACCTGTCGGAAATGGCCACGCCGGGCCACAAGGGCTTCTACGTGAGCTGGCAGTCGGCCAGCCAGCAGGTGGCCATCGTCGTGGCGGCAGCCCTGGGCTACTGGCTCAACGTGACCTTCACCTCGCAGGAGATCGGCGACTTCTACTGGCGCGTGCCCTTCTTCGTGGGCTGCCTGATCGTGCCGGTGCTGTTCATCATCCGCCGCTCGCTGCAGGAGACCGAGGAGTTCATGGCGCGCAAGCACCGGCCCGACGCGCGCGAAATCTTCCGCTCGATGGTCACCAACTGGGGCCTGGTGGTCGCCGGGATGATGCTGGTGTCGATGACCACCGTGTCGTTCTACCTGATCACCGTCTACACGCCCACCTTCGGCAAGGCCGTGCTGCACCTGAGCACCACCGACGCGCTGGTCGTCACGCTGTGCGTGGCCATCTCCAACTTCATCTGGCTGCCGATCATGGGCGCGCTGTCGGACCGCGTGGGCCGCAAGCCGCTGCTGATCCTGTTCACGGTGCTGACCATCCTCACCGCCTACCCGTCGCTCAAGTGGCTGGTCGGCGCGCCGAGCTTCACGCGCATGCTCGAAGTCGAGCTGTGGCTGTCGTTCCTCTACGCCAGCTACAACGGCGCGATGGTGGTCGCGCTCACCGAGGTGATGCCCGTCAACGTGCGCACCGCCGGCTTCTCGCTGGCCTACAGCCTGGCGACGGCCGTGTTCGGCGGCTTCACGCCGGCCATCGCGACCGGGCTGATCGAGATGACCGGCGACAAGGGCGCGCCGGGGCTGTGGATGACGGCCGCCGCGATATGCGGGCTGATCGCCACGCTGGTGCTGTACCGGCGCAACGTGAATCCGGCGGACGCGCGGCGCGTGCCGGCGGTCTGA
PROTEIN sequence
Length: 447
MNPAPSTAQKGTAAAHASPAPSSKFATVLRVTGGNFMEMFDFFLFGFYATQISKAFFPAGDEFASLMLTFMTFGAGFLMRPLGAIFLGAYVDRVGRRKGLIVTLALMATGTLLIACVPSYATIGLVAPLLVLIGRLLQGFSAGVELGGVSVYLSEMATPGHKGFYVSWQSASQQVAIVVAAALGYWLNVTFTSQEIGDFYWRVPFFVGCLIVPVLFIIRRSLQETEEFMARKHRPDAREIFRSMVTNWGLVVAGMMLVSMTTVSFYLITVYTPTFGKAVLHLSTTDALVVTLCVAISNFIWLPIMGALSDRVGRKPLLILFTVLTILTAYPSLKWLVGAPSFTRMLEVELWLSFLYASYNGAMVVALTEVMPVNVRTAGFSLAYSLATAVFGGFTPAIATGLIEMTGDKGAPGLWMTAAAICGLIATLVLYRRNVNPADARRVPAV*