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SCNpilot_cont_300_bf_scaffold_455_curated_3

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1956..3413)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000375675B similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 486.0
  • Bit_score: 864
  • Evalue 3.80e-248
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 485.0
  • Bit_score: 862
  • Evalue 6.00e-248
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJL79680.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 485.0
  • Bit_score: 862
  • Evalue 2.00e-247

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGGAACCACTTTTCGAGCTAGCCATCCGCCTGCCGGGCGCCGGCTCGCGCGACCTGCTGCGCGAGATGCACCGCCAACTGCGCGCCGCCATCCTCGACGGCCGGCTGCAGCCCGGCGCGCGCCTGCCCGCCACGCGCGCGCTGGCGCAGCGGCTCGGCGTGTCGCGCAACACGGTGCTCGCGGCCTACGACCTGCTGCTGAGCGAGGGCTATCTGCTGGCACGCCCCGGCGCCGGCACTTATGTGGCCGACACCCTGCCCGCCTCGCGGCGCGGCCGGCCCGCACGCGGCTCCATGGCCCGACGCGACCCCCGCCTGGTGCCGCTGCACGTGCCCGGCGCCGATCTCGCGCCGACGCTGCAGCCGCAGGCGTCGCGCGACGACTTCCGCGTCGGCCTGCCCGACGTGAGCGCCTTCCCCTTCGACATCTGGCGGCGCCTGTCCGACCGCGCGCTGCGCCGCATCGCGCGCCAGACCGCCGACTACGCCGACCCGCAAGGCCAGGCCGCGTTGCGCGAGGCGATCGCCGGGCATGTGTCGTTCACGCGCGCGGTGGGCTGCGCCGCCGACGACATCGTCGTGACGGCCGGCGCGCAGCAGGCCTTCGGGCTGCTCGCGCGCATCCTCGTCGTGCCGGGGCGCACGGTGGTCGCGGTCGAGCAGCTGTTCTATCCCTCGCTGCGCGAAGCCATGCTGGCCGCCGGCGCCAGGGTGGTCACCGTGCCGACCGACGCCGAAGGCCTGTGCGTCGAGCGCATTCCGCCCGAAGCGCGCGTGGTCTGCGTGACGCCGTCGCACCAGTTCCCGACCGGCGTCGCGATGTCGCCGCAGCGGCGCGCCGCGCTGCTCGCCTTCGCGCGGGCGCGCAACGCGGTCGTCATCGAGGACGACTACGACAGCGAATTCCGCTTCGCCGGCCGCCCGCTCGACGCGTTGCAGACGCTGGACCGCGCCGAGTCGGTCTTCTACGTCGGCACCTTTTCCAAGAGCCTTTTTCCCGCGCTGCGCCTGGGCTTCGTGGTCGCGCCGCCCTGGGCCCGCGCGGCGCTGGTACGAGCACGCGAACTGGCCGACTGGCACGGCCCGGTGCTCGGGCAGGAGGCGCTGGCGGCCTTCATCGCCGAAGGGCACCTGGCACGGCACATCCGCAAGATGCGCAAGCTGTACGGCGCGCGGCGCACCGCCCTGCTCGACGCATTGGCGCGGCACGGCGAAGGCCGGCTCGAGGCCATTCCCTCCAACGCCGGGCTGCACCTGTCGGCCTGGCTGCATGGAAAAACGCGCGCCGACGCCGTGGTCGAGCGCGCCGCCGCGGTCGGCATCACGCTGCCGCCACTGTCGCGTTTCGCGCTCGACCCGCAGGCGCCCGACGTGCCCAACGGGCTCGCGTTCGGCTACGGGCTGATCGGCGAATCGCAGACCGACGGCGCCGTCCGGCGGCTCGTGCAACTGCTCTGA
PROTEIN sequence
Length: 486
MEPLFELAIRLPGAGSRDLLREMHRQLRAAILDGRLQPGARLPATRALAQRLGVSRNTVLAAYDLLLSEGYLLARPGAGTYVADTLPASRRGRPARGSMARRDPRLVPLHVPGADLAPTLQPQASRDDFRVGLPDVSAFPFDIWRRLSDRALRRIARQTADYADPQGQAALREAIAGHVSFTRAVGCAADDIVVTAGAQQAFGLLARILVVPGRTVVAVEQLFYPSLREAMLAAGARVVTVPTDAEGLCVERIPPEARVVCVTPSHQFPTGVAMSPQRRAALLAFARARNAVVIEDDYDSEFRFAGRPLDALQTLDRAESVFYVGTFSKSLFPALRLGFVVAPPWARAALVRARELADWHGPVLGQEALAAFIAEGHLARHIRKMRKLYGARRTALLDALARHGEGRLEAIPSNAGLHLSAWLHGKTRADAVVERAAAVGITLPPLSRFALDPQAPDVPNGLAFGYGLIGESQTDGAVRRLVQLL*