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SCNpilot_cont_300_bf_scaffold_455_curated_8

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7173..8627)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Variovorax paradoxus RepID=UPI000361E0AD similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 486.0
  • Bit_score: 827
  • Evalue 8.80e-237
Variovorax paradoxus strain MEDvA23 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35772.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 490.0
  • Bit_score: 827
  • Evalue 9.50e-237
multi antimicrobial extrusion protein mate similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 494.0
  • Bit_score: 819
  • Evalue 5.80e-235

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
ATGCCAATAACCGAAACAGCCGCCGGCGCCGGGCGTCCGCGCTTCGTTTCGGGCTCGCTGATGCGCCATGTCTGCGTCATGGCGGGCACGGGCGCCATCGGGCTGATCGCGGTGTTCGCGGTCGACCTGATCAACCTGTTCTACATCTCGCTGCTCGGTGAAAAAGAGACGGCGGCGGCGGTCGGTTTCGCGGGCGTGGTGGGGTTCTTCCATGCGTCGCTGTGCATCGGGCTGACCATCGGCATCGCGGCCGTGGTGTCGCGCACGGTGGGCGCGGGGCGCATGGACGACGCGCGCCGCATCGGCACTTCGAGCCTGGTGTTGATGGTGGCTCTGTCGGTGCTGGCGGGCACGGGCACGGCCTTCTTCCTGCATCCGGCGCTGCAGGCGTTGGGCGCGCAGGGCGAGACGGCGCGGCTCGCGCATCGCTATCTGTCGGTGACGGTGCATACGCTGCCGCTGCTGGGCATCGGCATGGCGACTTCGGCGCTGCTGCGTTCGGTGGGCGACGCGCGCCGCTCGATGACGGTCACGCTGGCGGGCGCCTTCGTGACGGCGGTGCTCGACCCGATATTGATCTTCGGCTTCGGACTGGGGCTCGACGGCGCGGCCATCAGCGCGGTGGTGTCGCGCACGGCATTGGCAGCCCTCGGGCTGCACGGCGTGCTGGTGAAGCACCGCATGCTCGGCCCCTTCCAGGCTTCGCGGCTCGGCGCCGATGCGCGCGCGCTCGGGTCGGTGGCGGGACCGGCGGTGCTGACGAACCTGGCCACGCCCGTGGGCGCGGCCTTCGTCACGCATGCGGTGGCGCAGTTCGGTCCCTCGGCGGTGGCGGGCGCGGCCACCATCGACCGGCTGACGCCGGTGGCCTTCGGGCTGGTCTATGCGCTCAGCGGCGCCGTAGGACCGATCCTGGCGCAGAACCTGGGCGCGGGGCAGTACCGCCGCGTGCAGGAAGGGCTGCGCGCCAGCCTGCTGTTCATGGTGGCGTCGGTGGCCGTGGCGTGGCTGTTGCTGGCGCTGGGGCAAGGCCTGCTCGTTCGCGCGTTCTCGGCCGAAGGGCAGGCGGCGGAACTGATCTCTCTGTTCTGCAGCTGGCTGGCCGCGAGCTTCTTCTTCGCGGGCGGGCTGTTCGTGGCGAACGCGTCGTTCAACAACCTCGGGCATCCGCTGCTGTCGACCGGCTTCAACTGGGGGCGCGCCACGCTGGGCACGATCCCGTTCGCCTGGTGGGGTTCGCACTACGGCGCAGCCGGCGTGCTGATCGGGCAGGCCGTGGGCTCGTCGATCTTCGGCTTGCTGGCGGTGGTGGTGGCGTTCCGGCTGGCCGCGAAGCTGGCGCGGCAGGAAGCCCCCGATGCGGCGCCGGCCCCGGTGCTCGACGCGCCGGTGGCGCCGACATCGGCGCTGGCCACGCCGCAGCCGGCCGTTACTGCTCCAGCAGCCGCACCTTGA
PROTEIN sequence
Length: 485
MPITETAAGAGRPRFVSGSLMRHVCVMAGTGAIGLIAVFAVDLINLFYISLLGEKETAAAVGFAGVVGFFHASLCIGLTIGIAAVVSRTVGAGRMDDARRIGTSSLVLMVALSVLAGTGTAFFLHPALQALGAQGETARLAHRYLSVTVHTLPLLGIGMATSALLRSVGDARRSMTVTLAGAFVTAVLDPILIFGFGLGLDGAAISAVVSRTALAALGLHGVLVKHRMLGPFQASRLGADARALGSVAGPAVLTNLATPVGAAFVTHAVAQFGPSAVAGAATIDRLTPVAFGLVYALSGAVGPILAQNLGAGQYRRVQEGLRASLLFMVASVAVAWLLLALGQGLLVRAFSAEGQAAELISLFCSWLAASFFFAGGLFVANASFNNLGHPLLSTGFNWGRATLGTIPFAWWGSHYGAAGVLIGQAVGSSIFGLLAVVVAFRLAAKLARQEAPDAAPAPVLDAPVAPTSALATPQPAVTAPAAAP*