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SCNpilot_cont_300_bf_scaffold_455_curated_13

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(11407..12105)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CW30_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 232.0
  • Bit_score: 404
  • Evalue 8.90e-110
Transcriptional regulator {ECO:0000313|EMBL:EJL79669.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 232.0
  • Bit_score: 404
  • Evalue 1.20e-109
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 234.0
  • Bit_score: 399
  • Evalue 9.00e-109

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGACGCCGCAGCATCCGCAGAAGAACACCATGGCCGTCCCGCAGACCGATTCCCGTCCCCCGCCCAAGCGCCGCGCCGCCGACCTCGCCTACGACGCCATCGAGACGCTGCTGTCCACAGTGCAGCTCGAGCCGGGCAGCCAGATCGCCGAGGCCGACCTGGCCGAGCGCACCGGGCTCGGCCGCACGCCCGTGCGCGAGGCGCTGATGCGCATGGTGTCGATCGGCCTCATCGTGCAGCAGCCGCGCCGGGGCCTGCTGGTGTCGACCATCGACCTGGCCGACCACCTCGACGTGATCCAGACGCGGCGCGTGCTCGAGCGGCTGATTGCCGCGTGCTCGGCGCGCCGCGCCACCGCGCAGCAGCGCACGGGCATCGTGCATTGCGCCGAGATGATGGTCGAGGCCGCGGGCCGTGGCGACCTCAACGACTACATGAAGGCCGACCGCGCGCTCGACCTCGTCAACCACCAGGCGAGCCACAACGATTCGGCGGTGAAGGCCGTGGTGCCGCTGATCGTGCAGTGCCGGCGCTTCTGGTACGCCTACCAGCACGAGGGCGAGATCGTCGAGGGCGCCAACGCGCACCTCGAACTGGCGCAGGGCATCGCCACCGGCGACGAGGCCGCCGCCATCGCCGGCGCCGACCGGCTGATGGACTACCTCGAAGTGTTCGCGCGCAAGATCATCGACAAGTAG
PROTEIN sequence
Length: 233
MTPQHPQKNTMAVPQTDSRPPPKRRAADLAYDAIETLLSTVQLEPGSQIAEADLAERTGLGRTPVREALMRMVSIGLIVQQPRRGLLVSTIDLADHLDVIQTRRVLERLIAACSARRATAQQRTGIVHCAEMMVEAAGRGDLNDYMKADRALDLVNHQASHNDSAVKAVVPLIVQCRRFWYAYQHEGEIVEGANAHLELAQGIATGDEAAAIAGADRLMDYLEVFARKIIDK*