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SCNpilot_cont_300_bf_scaffold_417_curated_9

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 9601..10227

Top 3 Functional Annotations

Value Algorithm Source
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P2_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 214.0
  • Bit_score: 383
  • Evalue 1.10e-103
tripartite ATP-independent periplasmic transporter dctq component similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 214.0
  • Bit_score: 383
  • Evalue 3.50e-104
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADU35939.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 214.0
  • Bit_score: 383
  • Evalue 1.60e-103

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCAAGGCTTGCTCAAGCTTTCCCGGGCCATCGACTGGCTCAATGCCCAGGTGGGCAGATACGCGATCTGGCTGATCCTGGCCGCCACGGTGATCAGCGCGCTCAACGCGGTCGTGCGCAAGATATTCAACACCAGCTCGAACGCGTTTCTCGAAGTGCAGTGGTATCTGTTCGCCTGGTCGTTCCTGATCGCCGCCGGCTTCACGCTGCTGCACCGCGAGCATGTGCGCATCGACGTGATCAACAGCCGCCTGTCCAAGCGCAAGCAGGTATGGATCGACATCATCGGCTTCGCGTTCTTCCTGACGCCGCTGTGCCTCACGGTGCTCTACCTGTCGATGCCGGTGGTGATGCAGATGTTCCGTTCGGGTGAAATGTCCGGCAACTCGGGCGGGCTGATCCGCTGGCCCGTGTGGGCGGCGCTGCCGGTCGGCTTCGTGCTGCTGATGCTGCAGGGCTGGTCCGAACTGATCAAGCGCATCGCATTCCTGCGCGGCCAGGGTCCGGACCCGATGGGCCGGCTGACCGACAAGACGGCCGAGGCCGAACTGATCGAAGCCCTGCGCCTGCAGGCCGAGAAAGACGCAGCCAAGGCCGGTACGCCGGCCCCGGGCCCGCAACACTGA
PROTEIN sequence
Length: 209
MQGLLKLSRAIDWLNAQVGRYAIWLILAATVISALNAVVRKIFNTSSNAFLEVQWYLFAWSFLIAAGFTLLHREHVRIDVINSRLSKRKQVWIDIIGFAFFLTPLCLTVLYLSMPVVMQMFRSGEMSGNSGGLIRWPVWAALPVGFVLLMLQGWSELIKRIAFLRGQGPDPMGRLTDKTAEAELIEALRLQAEKDAAKAGTPAPGPQH*