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SCNpilot_cont_300_bf_scaffold_417_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20045..20968)

Top 3 Functional Annotations

Value Algorithm Source
polyprenyl synthetase; K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 307.0
  • Bit_score: 525
  • Evalue 1.40e-146
polyprenyl synthetase n=1 Tax=Variovorax paradoxus RepID=UPI00037B6034 similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 307.0
  • Bit_score: 543
  • Evalue 1.60e-151
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:EJL79100.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 307.0
  • Bit_score: 536
  • Evalue 2.80e-149

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGAGCACGGCCACGACGGCGGCTCCCCCCCGGTGGGACGCAAAGACCCTGGCCGCCTGGTGTGATCCGCATCTGGCGAACGTCGAGTCGGCGCTGTCGCGCTGGGTCGGCGTCGACGCCCCCGTGCTGCTGGGCGACGCCATGCGCTATGCCGTGCTCGACGGCGGCAAGCGCCTGCGGCCCCTGCTGGTGCTGGCCGCGAGCGAAGCCGTTGGCGGCAATAAGGCCGCCGCGCTGCGCGCCGCCTGCGCCACCGAGCTGATCCACGCCTATTCCCTCGTGCACGACGACCTGCCGTGCATGGACAACGACGTGCTGCGCCGCGGCAAGCCCACGGTCCACGTCAAGTTCGGCGAAGCCGACGCCCTGCTGGCCGGCGACGCGCTGCAGGCCCTGGCCTTCGAGCTGCTCACACCCGAAGACGACGAGATTCCCGCCGCCACCCAGGCCCTGCTGTGCCGCCTGCTCGCGCGTGCCGCGGGCAGCCAGGGCATGGCCGGCGGCCAGGCCATCGACCTGGCCAGCGTGGGCATTGCGCTCGACGAGACGCGTCTGCGCGAAATGCACCGCCTGAAGACCGGCGCGCTGCTGCAGGGCAGCGTCGAGATGGGCGCCGCCTGCGGCAGCGTGACGCCGGACGCCCTGGCCGCGCTGCGCGACTACGGCGCCGCCATCGGCCTGGCGTTCCAGGTGGTCGACGACATCCTCGACGTCACGGCCGACTCGCAAACCCTGGGCAAGACCGCCGGCAAGGACGCCGCGGCCGACAAGCCCACCTACGTATCGCTGCTCGGCCTCGACGGCGCACGCGCCCAGGCCCGGCAACTGCTGGCCGATGCGCTCGCCGCGCTGGAAAAGAGCGGCCTGGCCGACACCTCGGCCCTGCGCGCGCTCGCCCACATGGTGGTCGACCGCGACCGCTGA
PROTEIN sequence
Length: 308
MSTATTAAPPRWDAKTLAAWCDPHLANVESALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNKAAALRAACATELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLTPEDDEIPAATQALLCRLLARAAGSQGMAGGQAIDLASVGIALDETRLREMHRLKTGALLQGSVEMGAACGSVTPDALAALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGLDGARAQARQLLADALAALEKSGLADTSALRALAHMVVDRDR*