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SCNpilot_cont_300_bf_scaffold_417_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 35060..36649

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2KVU2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 529.0
  • Bit_score: 982
  • Evalue 1.40e-283
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL77108.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 529.0
  • Bit_score: 982
  • Evalue 1.90e-283
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 532.0
  • Bit_score: 954
  • Evalue 1.60e-275

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1590
ATGATGCAACGACGCACGCTTGCCGCCTTCGCCGCCCTGGCGCTTTCCGGCGCCTTCGCCGCGAGCCTTCCCGCACTCGCCCAGACGCCGCCCAAGACGCTGAAGGTGGTGGCGCACGCCGACCTGAAGATCCTCGACCCGACCTTCACCACGGCCTACATCTCGCGCAACTTCGGCTACATGGTCTACGACACCCTGTTCGCGCAGGACTCAAGCGGCAAGCCGCAGCCGCAGATGGTCGAGAAGTACACCACCTCGAAGGACGGCAAGCAGTGGACCTTCACGCTGCGCCCGAACCTGAAGTTCTCCGACGGCAGCGCCGTGACCGCGGCCGACGCCGTGGCCTCGCTGCAGCGCTGGGCCGCGCGCGACAGCCTGGGCCGCGCCATGACGGCGGTGGGCGCCGAATGGAAGGCCACCGACGCGCGCACCCTCACGCTCACGCTGAACGAGCCCTTCGGCATGGTGCTCGACGCGCTGGCCAAGCCATCGGGCTTTCCGCCGGTGATCCTGCCCGAGCGGCTGGCCAAGATGCCCGCTTCCGCGCCGCTGCCCGAAGTGCTGGGCTCCGGACCCTTCATCTTCAAGCGCGACGAATGGGTGCCGGGCAACAAGACGGTGTTCGTGCGCAACCCCAACTATGTGCCGCGCAGCGAGCCGTCGAACGGCCTGGCGGGCAGCAAGAAGAGCAACTTCGAGCGCGTGGAGTGGCTCTACCTGCCCGACGCCAACAGCGCCGTGTCGGCGCTCAAGCGCGGCGAGGTCGATTTCATCGAGCAGCTGCCGCCCGACTACATCGCGCCGCTGCGCACCGATTCGAACGTCAAGATCGGCTCCGGCGGCGCCTACCAGGCCTTCCTGGTGATGAACCAGCTGCACCCGCCCTTTGACAACCCGAAGGTGCGCCAGGCGCTGCTGCAGGCAGTGAACCAGGAGCGCTTCATGGCCGGCATGGGCTTCCCGCTGGACATGCGCATGGCCTACTGCGCCACCTACTTCATCTGCGGCAGCCCCAACGACACCTCGGCCGGCGCCGAGCCCTACCGCAAGGCCGACGTGGCCAAGGCCAAGAAGATGCTCGCCGACGCCGGCTACAAGGGCGAGAAGGTGGTGCTGATGGTGCCCAGCGACGTGCCCTACCTCAACGCGGAGGCCCTGATGGCCGCGCAGACCATGAAGAGCATCGGCCTGAACGTCGATGCCCAGACCATGGACTGGGCTTCCATCGGCGCGCGCCGTGCCAAGCGAGACGCCGGCGACGCCGGCGGCTGGAACATGTACGTCACGGTGGCCGGCGAGTTCGACGCCAACTCGCCCATCGCCAACGCCTACCTGGGCGCGGCCTGCGGCAACACCCTGCCCGGCTGGCCCTGCGACAAGCCGCTCGACGAACTGCGCACCGCCTGGCTGAAAGAAACCGTGCCGGCCAAGCGCAAGGAACTGCTCGACGCCTTCCAGGCCCGCGCCTACGAGGCCGTGCCGTACATCAACGCCGGCCAGTACTCGGCCGCGTATGCCGCGCGCTCCAGCCTCAAGGGCCTGGACAAGCTCTGGGCCGGCATGCCGGTGTTCTGGGCGCTCGACAAATAA
PROTEIN sequence
Length: 530
MMQRRTLAAFAALALSGAFAASLPALAQTPPKTLKVVAHADLKILDPTFTTAYISRNFGYMVYDTLFAQDSSGKPQPQMVEKYTTSKDGKQWTFTLRPNLKFSDGSAVTAADAVASLQRWAARDSLGRAMTAVGAEWKATDARTLTLTLNEPFGMVLDALAKPSGFPPVILPERLAKMPASAPLPEVLGSGPFIFKRDEWVPGNKTVFVRNPNYVPRSEPSNGLAGSKKSNFERVEWLYLPDANSAVSALKRGEVDFIEQLPPDYIAPLRTDSNVKIGSGGAYQAFLVMNQLHPPFDNPKVRQALLQAVNQERFMAGMGFPLDMRMAYCATYFICGSPNDTSAGAEPYRKADVAKAKKMLADAGYKGEKVVLMVPSDVPYLNAEALMAAQTMKSIGLNVDAQTMDWASIGARRAKRDAGDAGGWNMYVTVAGEFDANSPIANAYLGAACGNTLPGWPCDKPLDELRTAWLKETVPAKRKELLDAFQARAYEAVPYINAGQYSAAYAARSSLKGLDKLWAGMPVFWALDK*